Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02173 ATGAAGTTGCTTCCACCAATAATGTTTCATTTAGTATTATTTATTAGTTGTTTTTATTTTGGTAGAGCCATAGATTGTGGTGGGAAGCAAGTAGCAAATACCATCATTGTTGACCAACATAGAAAAGGAGCATTCCAAACAATTCAAGCTGCCATTGATTCTATAAAGGACCCAAATAATCGATGGATTATGGTTAAAATAAACCCTGGCATATACAAGGAAAAAGTTCTTATACCATGTACAAAGTCGTGCATTATTTTAAAAGGATCGGGTAGAAATAACACAATTATTACTAACAACAAATCATTTCATGAAGGTGGCCAATCCATGAGTGCTACATTTCAATCATCTCCACCTAATGTAGTTTTGAGTGACATTACATTCAAAAACACATTTGGATATGATGGACCAGCAGTAGCAGCTTCTATATATGGTGATAAGACTGCAATTTTTAAATGTAGTTTCATTGGTTATCAAGATACCTTACTTTCAGCAACAAGACGCCAATACTTTAAAAATTGCTATATTCAAGGTGAAGTAGACTTCATCTGTGGTGATGGTCAATCATATTTTGAGAATTGTGTGATGCATGCCACTCAAGGAAAATCTAGACCTCTAGGTTTTGTAACAGCACAACATAGGGATAAACCCAATGAACCAAGTGGTTATGTTTTTAGAGGAGGGGCAATTGTTGGAAATGGCCAGGTGAATCTTGGAAGACCTTGGGGACCTTATGCAAAAGTTATATTTTGGGGAACATATTTTTCTTCGGTGGTAACTCCTCAAGGATGGACTGCTTGGAATGATTCAATGATAAGCCAAGAGCAAAAGACCACATTTGCAGAAGTTAATTGTAGAGGACCAGGGGCAGACACTAAGGAACGTGTCAAGTGGGAGAAGAAACCAAAAGACTTAAACTTAAAAGAATATACTTTGACATCTTTCATAAATAATGATGGATGGCTTGCCAATATACCATCTATATAA 987 0.3597 MKLLPPIMFHLVLFISCFYFGRAIDCGGKQVANTIIVDQHRKGAFQTIQAAIDSIKDPNNRWIMVKINPGIYKEKVLIPCTKSCIILKGSGRNNTIITNNKSFHEGGQSMSATFQSSPPNVVLSDITFKNTFGYDGPAVAASIYGDKTAIFKCSFIGYQDTLLSATRRQYFKNCYIQGEVDFICGDGQSYFENCVMHATQGKSRPLGFVTAQHRDKPNEPSGYVFRGGAIVGNGQVNLGRPWGPYAKVIFWGTYFSSVVTPQGWTAWNDSMISQEQKTTFAEVNCRGPGADTKERVKWEKKPKDLNLKEYTLTSFINNDGWLANIPSI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02173 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 323 - -
Trre11g02173 328 FunFam Pectinesterase 29 326 - -
Trre11g02173 328 SUPERFAMILY Pectin lyase-like 31 322 IPR011050 -
Trre11g02173 328 Gene3D - 28 327 IPR012334 -
Trre11g02173 328 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Trre11g02173 328 Pfam Pectinesterase 35 318 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02173 Trre-Chr11 25344838 25347801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02173 9 267 Carbohydrate Esterase AT2G19150 41.636 5.06e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02173 - - tpra:123922273 389.423