Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02169 ATGGAGGGTTTCTTGACAGAATTAGGGAAGACACTTGTAGAGAAATTGATAAACGGTGTAATAGAGAAATCACGTTATCTATTTTGCTTCAAGTGCATTGCTAAGGAATTTGAATCAGAAAAGGATAATTTGGAAGCAGAAAGGAAAACTATGAGGCAACGTTTTGGAGTGGCAATTGAAAAAGATAAAGATATTCAATTTAATGCTCAATTTTGGGAAGAGCAGGCTGAGAAGTTCATTCAAGAGGACACTAAGACAAATCAAAGATGTTTTTTTGGATTTTGCCCTAATTGCATATGGCGATATAAAAGGGGAGAGGAGTTGGCAAACAAGATAGAGGAAATTAAAAAATTGGTGGAAAAGGGAGAGAAATTTGAAAATATTGAACTCGCTCATCGTCTACCGGATGTAGAGCGTTATTCTTCTCAATATTACATTTCTTTTAAAAGTAGGGATTTGAAATATAAAGAGCTTTTGGAAGCACTAAAAGATGACAGTCACTTTATAATTGGATTGCATGGGATGGGGGGCACAGGTAAAACTACATTGGCAAAAGAAGTGGGCAAGCAACTTAAGGCTTCAAAGCAATTCAATTGTGTCATCATTACTACTGTGTCAAATACTCCTAATATAAAAAAAATTCAAGATGATATTGCTGGACACTTGGGATTGGAATGGGAGAACATCAGTGAGTCAAACCGGCATACAAAACTATGGAGTAGATTAACCAATGGTGAGAAGATTCTTGTGATATTAGATGATGTGTGGGGATATCTCAATTTTGATGACATAGGGATTCCAAATAGTGATCATCGCAAAGGATGCAAAGTTCTTGTAACCACACGATATCGGTGGGTATGCAACAAAATGGCATGTGGAATAACAATTCAACTAGAGCTCTTATCCGAAGAAGACGCATGGGACATGTTCAAAATGCATGCTGATCTAAGTGATAATTCCTCCAAAGGTCTTCTCAAACAGGGACGCAAACTTGCAAATGAATGCAAAGGATTACCAGTTGCAATTGCTACCATTGCCAGCAGTTTGAAGGGACAAAAAGGTCGAGAAGAATGGGATGTTGCCTTAAAGTTCTTAAAAAATCCTATGTCCATGGGCGATGTTGAGGAAGATTCGGTTTACATTTATAAATGTTTGAAGTTTAGCTATGATAATTTGACTGACAAAAAAGCCAAGGAATTGTTCCTTTTATGTTCTGTATTTCAAGAAGATGAAGAGATCTCTATTGAAATATTAACCAGACTTGGCATAGGAGTCGGCCTCTTTAGGGAAGGTTGTGACAAATACAACGATGCTCGAAATCTAGTAGTTGTAACCAAAAATAAACTCCTTGATTCAAGTTTGTTGTTGAAGACAAATAAAAGAGATGTAAAAATGCATGACTTGACCCGGGAAGTAGCCCATTGGATTGCGAACAAAGAGATTCTAGTGGTAAATTCTTCTAACAAAAATAAAATGTCATCATTAGTTGAAAAGAGTAATATCAAATATTTGTTATTTGAGGGAAATTCAATGGATTTGTGTTCCTCTAGGTTTGATGGTTCTAAACTTAAGATTCTGATTTTCATCATGGACAAAGGTTCCTTTGTGGATTCATTCCTTAAAAATATTGCAGGGCTTCGAGTTTTGAATTTAATAGCAGGTAAAGACAGATTTTCAAAGGTTACTTTATCTTTACCACAATCAATCCAGTCATTGACGAATATTCGTTCTCTATTAATTAAAAGAGTCAATTTGGGTGACATCTCTGTTTTGGGAAGCTTGCAGAGTCTTGAGACACTTGATTTGAATTTTTGTACAATTGACGAACTTCCACAAGAAATTTCTGAATTGAAGAAATTTCGATTGTTGAACTTGGAAAAATGTAACATTAGAAGTAGTAATCCATTTAAAGTTATCCAAAGATGCCCATTACTTGAGGAATTGTACTTCTTGAATAGTTTCAATGATTTTTGTGAGGAAATAACCGTACCTACATTGGAAAGGTATCATCTCACTGATTTTTATCGTTACGATTCTTCACTATCAAAATGTGTGTCTCTTCGTCATCATTATTTGTCAGAAGCAACATATATGTATGTGATTCAAACAGCAGAGTATCTTAAATTGCAAAGCATTAAGAAAGGGTGGAGGAATCTGATGCCTGAAATTGTTCCTATAGATCAAGGTATGAATGATCTAATTGAGCTTTGGTTGAAATATGATTCACAACTAGAGTGCCTCATAGACACTGAACATATTGGTTCTCCAGTACCAAATGTCTTTACCAATTTGGTTGTACTAAAGCTCGAGAAAATGGAAAATTTGAAACAATTATGCAATGGTCCCATCTCCTCTGACTTTTTGAACAATTTAGAGAAACTAACTATCATGTATTGTGGAAATTTGAGAAGTTTGGTTAAATACAGCCTAAATCTCTGCAATCTAAAGACAGTGATACTAATATCATGCTCAAAATTGGTTTCTGTTTTTGATTTGTCAACTTCTCAAAGTCTGTTGTTGCTGGAGTGCTTGAGTATAACTGATTGTAAGCAATTAAAAGACATATTTACAAATGAAAGGAAATCAAATTTTCCAGTTGATGGTGATAATGACAATAACAAGACGTGTAACTCATTGTTTCCAAAGCTGGAATCTATATATATAGCACGTTGTTATAATCTGAAACACATATTTGGCCAACACCAAGACGTGGAACTTGCTTCACTGAAAAAGTTGGTATTAAAGTTTTTGCCAAATTTCATCGGCATATTTCCAGAATCATATCATTCTTTTGAAGGGTCATCACATTCCATTTCAAAGCCACAAATACAATTGGAGGTGGAGCCTATCAAATCCAATAGGTTCCCATGGAGTCATGAGTGTTGTGGATATAAATTGAGGGGTAGCAGTAGCAGTAGCAGTAGCACAAGTAATAAAATTGCAATCCCATCAGTTTATGAGGATCAACCGCAACACAGCTCAATCCCATTGCACATAGTAGTAGACATTGGAGATGGCAGTGGTACTACTGGGGTCAATATTGTCTTCCCAAATTTAAAAGAGCTCAAAGTTTTTGATTGTGAGAAATTGGAATACATATTTGGACACATTAATGCTAGTGATCATCAATATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCATCAAAACCACCTTCATCTTCCAGCTTTTATATCTCTCTATCTTTCCTTTCTTCCAAGTTTAATCGGCATGGGTACCAAAAACTATCACATAACATTGCCACACTTGATGGAACTTAATCTCACTCGATGCCCCCAGTTTGTTTATTCTATGTCAAAATCTCAGGACACTACAACCACTAAGTTGCTTGATCTAAGAATAGAAGAATGTGATGAGTTGAAGTACATCGTTGAAGAAGATGATGATGATGATGTGGAGAATAAAGAAATATCAAATGATCATATGTCTCCAATTAGGACATGCTTTCCAAAGCTTAAAACACTTTCTGTCATAAAGTGTAACAAGTTGGAATATGTACTTCCAACCTCCATGTGTACAGAGCTTCCGGAGCTATGGTTACTCATGATAGCAGAAGCAGCTAAGCTAGAGAAAATATTCGGAGGAAGTGAAGAAAAAGTTGGGAGGTTTCCAAATCTAAATTCTGTAGTATTTGTCGAACTACCAAGCTTTATTCAGGGAATCCAATTTCAAACTATAGAACATCGTCTTGTACACGATTGTCAAAAACTCTCTTTGACTTCATCATCAACTCTCGCGTTTTATGAAGATAAATTAGATTATGATTTGTTCGTCTGTTTGGAACGACTATTACGAGAACATTCTGAAACCGAAGAAGATACAAATGCCACGCCGATTCAGTCATCAACATCTGAAACAAGGAATGAGCCACCTACACAATTAGATACCAAGTTAAGTTCTGAAGATCTTGATCTTGGTGACTCTAAACAAACAATTCATCAGACTAATAATCAAGTGGAGCCTTCTAAAGAAGAGTCTGAAGCAGCATCAAGGCAAGAGTTGACTTCTTCACAGATAAAAATGAAACAAGCATCAGAGGCAGAGCATGAATTTGTTAAAAATGTTCCTGATTTAGAGATACCACCTGTTGGTGAGTTTGATACGTCGTCTTCGATTATAACCAAGAAAGGCTTTTCGGAAAGGTTCGCGCGGCTGAATAATAAGCAATATTTGGGATTGTCGGTAGCTGTAGTTGGTATCTCAGTGGTTGCTGGTTTCTTATACTTACGGAAGAAGTAA 4284 0.3592 MEGFLTELGKTLVEKLINGVIEKSRYLFCFKCIAKEFESEKDNLEAERKTMRQRFGVAIEKDKDIQFNAQFWEEQAEKFIQEDTKTNQRCFFGFCPNCIWRYKRGEELANKIEEIKKLVEKGEKFENIELAHRLPDVERYSSQYYISFKSRDLKYKELLEALKDDSHFIIGLHGMGGTGKTTLAKEVGKQLKASKQFNCVIITTVSNTPNIKKIQDDIAGHLGLEWENISESNRHTKLWSRLTNGEKILVILDDVWGYLNFDDIGIPNSDHRKGCKVLVTTRYRWVCNKMACGITIQLELLSEEDAWDMFKMHADLSDNSSKGLLKQGRKLANECKGLPVAIATIASSLKGQKGREEWDVALKFLKNPMSMGDVEEDSVYIYKCLKFSYDNLTDKKAKELFLLCSVFQEDEEISIEILTRLGIGVGLFREGCDKYNDARNLVVVTKNKLLDSSLLLKTNKRDVKMHDLTREVAHWIANKEILVVNSSNKNKMSSLVEKSNIKYLLFEGNSMDLCSSRFDGSKLKILIFIMDKGSFVDSFLKNIAGLRVLNLIAGKDRFSKVTLSLPQSIQSLTNIRSLLIKRVNLGDISVLGSLQSLETLDLNFCTIDELPQEISELKKFRLLNLEKCNIRSSNPFKVIQRCPLLEELYFLNSFNDFCEEITVPTLERYHLTDFYRYDSSLSKCVSLRHHYLSEATYMYVIQTAEYLKLQSIKKGWRNLMPEIVPIDQGMNDLIELWLKYDSQLECLIDTEHIGSPVPNVFTNLVVLKLEKMENLKQLCNGPISSDFLNNLEKLTIMYCGNLRSLVKYSLNLCNLKTVILISCSKLVSVFDLSTSQSLLLLECLSITDCKQLKDIFTNERKSNFPVDGDNDNNKTCNSLFPKLESIYIARCYNLKHIFGQHQDVELASLKKLVLKFLPNFIGIFPESYHSFEGSSHSISKPQIQLEVEPIKSNRFPWSHECCGYKLRGSSSSSSSTSNKIAIPSVYEDQPQHSSIPLHIVVDIGDGSGTTGVNIVFPNLKELKVFDCEKLEYIFGHINASDHQYHHHHHHHHHHHHHHHHHHHQNHLHLPAFISLYLSFLPSLIGMGTKNYHITLPHLMELNLTRCPQFVYSMSKSQDTTTTKLLDLRIEECDELKYIVEEDDDDDVENKEISNDHMSPIRTCFPKLKTLSVIKCNKLEYVLPTSMCTELPELWLLMIAEAAKLEKIFGGSEEKVGRFPNLNSVVFVELPSFIQGIQFQTIEHRLVHDCQKLSLTSSSTLAFYEDKLDYDLFVCLERLLREHSETEEDTNATPIQSSTSETRNEPPTQLDTKLSSEDLDLGDSKQTIHQTNNQVEPSKEESEAASRQELTSSQIKMKQASEAEHEFVKNVPDLEIPPVGEFDTSSSIITKKGFSERFARLNNKQYLGLSVAVVGISVVAGFLYLRKK 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02169 1427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 404 IPR027417 -
Trre11g02169 1427 SUPERFAMILY L domain-like 464 1194 - -
Trre11g02169 1427 Gene3D - 300 393 IPR042197 -
Trre11g02169 1427 MobiDBLite consensus disorder prediction 1324 1338 - -
Trre11g02169 1427 MobiDBLite consensus disorder prediction 1283 1360 - -
Trre11g02169 1427 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Trre11g02169 1427 Gene3D Ribonuclease Inhibitor 521 668 IPR032675 -
Trre11g02169 1427 MobiDBLite consensus disorder prediction 1044 1063 - -
Trre11g02169 1427 MobiDBLite consensus disorder prediction 1289 1314 - -
Trre11g02169 1427 SUPERFAMILY RNI-like 1016 1204 - -
Trre11g02169 1427 PRINTS Disease resistance protein signature 242 256 - -
Trre11g02169 1427 PRINTS Disease resistance protein signature 592 608 - -
Trre11g02169 1427 PRINTS Disease resistance protein signature 169 184 - -
Trre11g02169 1427 PRINTS Disease resistance protein signature 335 349 - -
Trre11g02169 1427 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1002 1229 - -
Trre11g02169 1427 FunFam Probable disease resistance protein At1g61300 133 293 - -
Trre11g02169 1427 Gene3D Ribonuclease Inhibitor 1005 1252 IPR032675 -
Trre11g02169 1427 Gene3D Ribonuclease Inhibitor 669 865 IPR032675 -
Trre11g02169 1427 Coils Coil 34 54 - -
Trre11g02169 1427 Gene3D - 134 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02169 Trre-Chr11 25300331 25305895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02169 170 579 WRKY Transcription Factor Family AT5G45050 26.606 5.31e-17 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02169 - - tpra:123915110 1519.21