Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02136 ATGAACAAAGGTGGACCAGGTGGCGGTGGGCCCACTGCAGCAGCAGCGGCAGCTGCTGCTCAAAAACAGAAGACATTGTTGCAGAGAGTGGAAGGTGATATTGCCAACATCGTCGACAATTTCAGCCACCTTGTCAATGTTGCCAGGGTAAATGATCCACCTGTTAGAAATTCGCAGGAAGCTTTTATGATGGAGATGCGTGCTGCTAGGATGGTCCAAGCAGCTGATTCTCTACTTAAATTGGTGTCAGAGCTGAAGCAAACTGCAATATTTTCAGGATTTGCTTCCCTTAATGACCATGTAGAACAAAGAAGGGTTGAGTTTAACCAATTGGCAGAAAAAACAGACCATACATTATCTAGAATTGGAGAGGAAGCTGCAGCTAGTCTGAAAGAGCTTGAATCCCATTATTCGTCTTCTGCACAAAAGAATATTCAAGAGACACAACCATAG 453 0.4437 MNKGGPGGGGPTAAAAAAAAQKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRRVEFNQLAEKTDHTLSRIGEEAAASLKELESHYSSSAQKNIQETQP 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02136 150 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22 1 146 IPR009332 GO:0003712|GO:0006357|GO:0016592
Trre11g02136 150 Pfam Surfeit locus protein 5 subunit 22 of Mediator complex 28 127 IPR009332 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02136 Trre-Chr11 24974469 24976536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02136 K15139 - gmx:100787657 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02136 11 24974469 24976536 Trre11g02136 11 24974469 24976536 ECH