Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02125 ATGCAGACATATGGAAATGGGAAGACTACTATTTCAATATATGAAAGGAAAGCAAGCATAAGACAATTTTATTCGGTTATATTTCCTGCTCTATTGCAACTTCAAATGGGCAACACAGATTTGGATGAAAGGGGTGTTTGGAAGAAGCAGAGGATAAAAGTACTCAAGAGGGTTTTTCGTTTGAAACGGGGAATGATCCACATACAATTAATTTTTTATCTTAAACAAAAGGGAATCAAGTTAAGTGATGAAACAAGCTCACAAGATTTTGAAGATAACTATCAGTCCAAGACTGATTTGCTCAAAGCCGTTGCGATATTTGTCGCGGCTGCAACTGGGACAGTTGCAATTAACCATTCTTGGGCTGCTGCAAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTTTAGCATTCAACAAAAGTGGGGTAGGACTATTGATGGCTGTAAGCTTATGGGTGATAAGGAGTATTGGGGTAAATATCTATCTTTTATATGTTTTGGCTTTTGAGAATGTCAGATAA 555 0.3694 MQTYGNGKTTISIYERKASIRQFYSVIFPALLQLQMGNTDLDERGVWKKQRIKVLKRVFRLKRGMIHIQLIFYLKQKGIKLSDETSSQDFEDNYQSKTDLLKAVAIFVAAATGTVAINHSWAAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGVNIYLLYVLAFENVR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02125 184 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 82 170 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02125 Trre-Chr11 24919761 24921490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02125 83 169 Antiporters AT3G19490 80.460 1.06e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02125 - - cpap:110810493 155.221