Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02123 ATGACCAATTCTGAGTGGTCTCAATTTTTGTTCATAAACATCATTTTATTGGCAACCCTTTTCACATGCAACATCAATTTTGCATTTGGAACAGACCCATTTCTTCAACAAAAGAAAGACAGGATTGTTGAGCCACTCCCAGGTCAAAACTTCAACATCAATTTTAAACATTATTCTGGCTATATAACTGTTAACGAGGATGTTGGTAGAACACTGTTTTACTGGTTCATTGAAGCAGATCATGTAGATCCTACTTCAAAACCACTTGTTTTATGGCTTAATGGTGGTCCTGGTTGTTCTTCTATTGCTTTTGGTGAAGCTGAAGAAATTGGTCCTTTTCATATTAATTCAAATGGCACCCTTTATCTTAATCCTTATTCTTGGAATCAAGTTGCCAACATTCTTTATATTGATTCTCCTGTTGGAGTTGGATTTTCATATTCAAAGAATTCAACTGACATTCGCAACAGTGGTGATAAGAGGACAGCTGAGGACAATCTCATATTTCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATCAAGAAACCGATTTTTTCATCAGTGGTGAAAGCTATGCAGGACATTATGTTCCCCAACTTAGCCAAGTTATTGTCAAGCACAACTCAGCTACAAAACAAAATTCTATAAATCTGAAAGGTTACATGGTAGGAAATGCTCTAACAGACGATTTCAATGATCAATTGGGGATTTTCCAGTTTATGTGGTCAAGTGGTATGATTTCAGATCAAACATTCAAGCTCTTGAACCTACTATGTGATTTTCAGTCAGTCGAACATCCGTCAAAATCATGTGAAAAAATCTTGGAAATTGCTGATAATGAATTGGGTAATATAGACCCATACAGTGTTTTTACCCCTCCTTGCCATGGTAGTTCTAATCAGCGGGTTAAAAGAACGCATAGTATTGGAAGACTCAGAAGTGTGTATGATCCTTGCACAGAGAGCCACAGCATTATATACTTCAACCGGCCAGAGGTACAAAAAGCTCTACATGTTGATCCGGATCATAAGCCTGCTAAATGGGAGACCTGCAATATGGAGGTAAATACAAACTGGAAGGATTCACCTAGAACAGTGCTCGATATATATCGTGAACTTATTCCTACCGGACTGCGAATATGGATTTTCAGTGGTAATACAGATGCTGTAATCCCGGTAACATCTACTCGCTATACCATAGCCGCTCTTAAGCTTCCAACTGTGAGCCCCTGGCGTGCATGGTATGATGACGGAGAGGTAGGAGGTTGGACACAAGAATATGACGGACTTACGTTTGTAAACGTAAGGGGTGCAGGGCATGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAACATTGTTCAAAGCCTTCTTAGCAGGAACCTCCATGCCAACTCTTGAACCACTCTCACTCACCGCTGCCTATTGA 1428 0.3978 MTNSEWSQFLFINIILLATLFTCNINFAFGTDPFLQQKKDRIVEPLPGQNFNINFKHYSGYITVNEDVGRTLFYWFIEADHVDPTSKPLVLWLNGGPGCSSIAFGEAEEIGPFHINSNGTLYLNPYSWNQVANILYIDSPVGVGFSYSKNSTDIRNSGDKRTAEDNLIFLLKWFERFPQYQETDFFISGESYAGHYVPQLSQVIVKHNSATKQNSINLKGYMVGNALTDDFNDQLGIFQFMWSSGMISDQTFKLLNLLCDFQSVEHPSKSCEKILEIADNELGNIDPYSVFTPPCHGSSNQRVKRTHSIGRLRSVYDPCTESHSIIYFNRPEVQKALHVDPDHKPAKWETCNMEVNTNWKDSPRTVLDIYRELIPTGLRIWIFSGNTDAVIPVTSTRYTIAALKLPTVSPWRAWYDDGEVGGWTQEYDGLTFVNVRGAGHEVPLHRPKLALTLFKAFLAGTSMPTLEPLSLTAAY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02123 475 FunFam Carboxypeptidase 36 297 - -
Trre11g02123 475 Gene3D alpha/beta hydrolase 37 297 IPR029058 -
Trre11g02123 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
Trre11g02123 475 Gene3D - 319 357 - -
Trre11g02123 475 Pfam Serine carboxypeptidase 47 459 IPR001563 GO:0004185|GO:0006508
Trre11g02123 475 SUPERFAMILY alpha/beta-Hydrolases 40 463 IPR029058 -
Trre11g02123 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Trre11g02123 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Trre11g02123 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Trre11g02123 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Trre11g02123 475 FunFam Carboxypeptidase 316 463 - -
Trre11g02123 475 FunFam Carboxypeptidase 366 460 - -
Trre11g02123 475 Gene3D - 366 460 - -
Trre11g02123 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 447 IPR001563 GO:0004185|GO:0006508
Trre11g02123 475 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02123 Trre-Chr11 24900014 24905570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02123 329 463 Calmodulin-binding Proteins AT2G22960 25.000 2.13e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02123 K16297 - gmx:100805227 715.301