Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02112 ATGCTCTTCAGTTATTTTTACAAATTTGGATATATTGCTTCATTCAATGTGGTTCTTGCAATACATTTTTTGTTCACTGCTGGACAAGATCAAACACCAAACAAAATGAGTGATGTGGTAGCTATTAACTGGAAGGATTCTCCTAGAACTGTTCTTGATATATATCGTGAACTTATTCCTACTGGACTGCGAATATGGTTTTTCAGTGGTAATACAGATGCTGTAATCCCAGTAACATCTACTCGCTATACCATAGCCGCTCTAAAGCTTCCAACTGTGAGCCCCTGGCGTGCATGGTATGATGACGGAGAGGTAGGAGGTTGGACTCAAGAGTATGACGGACTTACGTTTGTAAACGTAAGGGGTGCAGGGCATGAAGTTCCTTTGCATAGACCAAAACTTGCTCTAACATTGTTCAAAGCCTTCTTAGCAGGAACCTCCATGCCAACTCTTGAACCACTCTCACACACCGCTGCCTATTGA 483 0.4203 MLFSYFYKFGYIASFNVVLAIHFLFTAGQDQTPNKMSDVVAINWKDSPRTVLDIYRELIPTGLRIWFFSGNTDAVIPVTSTRYTIAALKLPTVSPWRAWYDDGEVGGWTQEYDGLTFVNVRGAGHEVPLHRPKLALTLFKAFLAGTSMPTLEPLSHTAAY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02112 160 Gene3D alpha/beta hydrolase 7 152 IPR029058 -
Trre11g02112 160 SUPERFAMILY alpha/beta-Hydrolases 20 148 IPR029058 -
Trre11g02112 160 ProSitePatterns Serine carboxypeptidases, histidine active site. 115 132 IPR033124 GO:0004185
Trre11g02112 160 FunFam Carboxypeptidase 51 145 - -
Trre11g02112 160 Pfam Serine carboxypeptidase 16 144 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02112 Trre-Chr11 24599522 24600530 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02112 61 148 Calmodulin-binding Proteins AT2G22960 25.843 2.19e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02112 K16297 - tcc:18589023 199.519