Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02092 ATGGCTGCTGAATCGAAAAAAGCTGCAGATGAAATGAATAAGAAGAAGCTTCATGGTGATTCTTCAACGGCTGAACATAACAATTCCAACATGGTTCCTTCAAAGGGTGGTGGAAGTTCACCACCATCTGATGCAAGATCATGTGTATCATCATTAGGAGATGTTTCTGGTAGTTTTAAAGAAGGGGATGTGGATCATGAATACCAATTCACAGATCAGAATGTTCCTTATGCTGCTGCTGCTGCTGGTAGTTATTATGGATACTACTATCCAGGTTATGGTGGTTTCTATGGAGAACCAGAAAATCAAGGATATTATGTTGGTGCTGCTGATGCTGTGGATTTTCAGTATCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTGATGCCAGGATATCAGACTGGCTACTCTTCATACATTCCTGTGAATACACCTGCCGTCGATGGCCAGTATCAATTTTACCCTCCCGGTTCCGTCTATCAACAGCCAATTGGATCCCCCAGCTATTTTCCAGCTTCTGTACCTTATGCCGAGTTATTTCCATCAACATACACATGGGATTCATCTCTAACAACACAAGATGTATCAAATGGAAACCGTTACAACGAATTGGCTGGTAAACCAAGCAGTAGATCTAATTTTTCTTCTCAGAGTCATACTGGTAGTGGTGTCACGTCAAAGTCTGCGCCCTCATCTAATGTTAGCAACTCATCAGAAGTGAAGGGTTCCTCTCCGTTATTAGATGTCTCATCAACTCATGTTAAGCGTAATCAGCCAAAACAAGCCAATAAGGCATCCATTTCTGGCCCAGTTCTCCATTCAGATACAATGGCAAAAGGTTCTTTGCCCGTCGCAAAGTTTTCTGCATACAATCAAGCAAAGAGTGGATTTCCCTATCAAAACAACTTGCATAATGCGAAAGCAAATACAAAGGGATGGGTTAGTACTGAAAAGCTGAAACTGAGAAGCAAGGTTAATGATCCACTTACTGAGCAGAATCAAGGTCCTAGAACAGCTAATGCCAAAGGCGAAGTAAATTCTGGAGCTAATTCTGTGCGAATGGTGGCGGTCGATAAGAGTGGAAATGGTGACAGCAAAGTCAGGACGGATCAGTATAACCTTCCTGATTTTCCAACCACATATGATCATGCACTTTTCTTTGTCATCAAATCGTACAGCGAAGACGATGTCCACAAGAGCATCAAGTACAATGTATGGGCCAGTACTCCTAATGGGAATAAGAGGCTCGACAATGCATTTCAGGATGCACAAAATCGAATGGAACAGAATGGCAGCAAGTGCCCTGTATTTCTTTTCTTCTCGGTCAATGCTAGTGGTCAATTCTGCGGAGTAGCCGAGATGATCGGGCGAGTGGATTTCAACAAAAGTATGGATTTCTGGCAGCAAGATAAATGGAACGGATATTTCCCAGTCAAATGGCACATTATAAAGGACGTTCCAAATCCACAGCTACGGCATATTATACTCGAGAATAATGATCACAAGCCTGTAACAAACAGTAGAGACACACAAGAGGTACATTTTCCGCAAGGTATTGAAATGCTCAACATTTTCAAGAACTATGTATCAAAAACATCGATACTGGAGGATTTTGATTTTTACGAAGGTCGTCAAAAGGTGATGCAGGAGAAGAAAATAAGACAACCTATGATGCTTCATACCAATACACAGCATATAGATGGCTTAACAAGTGCACTTGGATCAGTAGACATATCAACTGTAAAGAACATGGAGGACCCTAAATTGGCTGAGAAAGTGAATGCAATCTGA 1797 0.4157 MAAESKKAADEMNKKKLHGDSSTAEHNNSNMVPSKGGGSSPPSDARSCVSSLGDVSGSFKEGDVDHEYQFTDQNVPYAAAAAGSYYGYYYPGYGGFYGEPENQGYYVGAADAVDFQYPVMQADNGSYVYLMPGYQTGYSSYIPVNTPAVDGQYQFYPPGSVYQQPIGSPSYFPASVPYAELFPSTYTWDSSLTTQDVSNGNRYNELAGKPSSRSNFSSQSHTGSGVTSKSAPSSNVSNSSEVKGSSPLLDVSSTHVKRNQPKQANKASISGPVLHSDTMAKGSLPVAKFSAYNQAKSGFPYQNNLHNAKANTKGWVSTEKLKLRSKVNDPLTEQNQGPRTANAKGEVNSGANSVRMVAVDKSGNGDSKVRTDQYNLPDFPTTYDHALFFVIKSYSEDDVHKSIKYNVWASTPNGNKRLDNAFQDAQNRMEQNGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVHFPQGIEMLNIFKNYVSKTSILEDFDFYEGRQKVMQEKKIRQPMMLHTNTQHIDGLTSALGSVDISTVKNMEDPKLAEKVNAI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02092 598 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 105 558 IPR045168 -
Trre11g02092 598 CDD YTH 388 527 IPR007275 GO:0003723
Trre11g02092 598 MobiDBLite consensus disorder prediction 1 52 - -
Trre11g02092 598 MobiDBLite consensus disorder prediction 199 274 - -
Trre11g02092 598 MobiDBLite consensus disorder prediction 327 352 - -
Trre11g02092 598 MobiDBLite consensus disorder prediction 1 22 - -
Trre11g02092 598 Pfam YT521-B-like domain 388 528 IPR007275 GO:0003723
Trre11g02092 598 ProSiteProfiles YTH domain profile. 386 527 IPR007275 GO:0003723
Trre11g02092 598 MobiDBLite consensus disorder prediction 199 272 - -
Trre11g02092 598 Gene3D ph1033 like domains 363 542 - -
Trre11g02092 598 MobiDBLite consensus disorder prediction 23 52 - -
Trre11g02092 598 MobiDBLite consensus disorder prediction 328 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02092 Trre-Chr11 23710018 23714232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02092 K20102 - gmx:100791190 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02092 11 23710018 23714232 Trre11g02092 11 23710018 23714232 ECH