Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02091 ATGCCCCTCTTTATCTCCGACGAAGAACTCTCGCGGTTATCCGGCGATACCACCGCCGTAGCCGCCAAAGCCGACGCCTACATCCGCGGCATCCTCAACGAACTCGACACCGTCCGCGCTAAAGCTGATGCCTCCGACATCAACGCCGAGCAGAATTGCTCTCTCGTTGAGCAGAAGTATCTCTCCCTCTCTTCAGAGTTCTCCAAGCTCGAATCCCACGCCGCCAGCCTCCAATCTTCTCTTGATCAACACCTCCGTGACCTCTCTGATGCCCAAGCGAAGAATCACCAATTTCAGTTGCAATTGGTTGAGAAGGATAGAGAGATAGAGAGGTTGAAGACGGAAGTGAGCGAGCTGCACAAGTCAAAGAGGCAGTTGATTGAGGTGAATGAACAGAAGGATTTGGAGATTAGTGAGAAGAACACAACCATCAGGAGCTACCTTGATAAGATTGTACATTTGACGGAAAATGCTGCCCAAAAGGAAGCACGCTTTAGTGAAGTTGAGGCAGAATTAGGGAGATGCCGGGCTGCTTGCGCTCGCCTCGAGCAGGAGAAGGAGATTGTTGAGAGGCAGAATGCTTGGCTTAATGAGGAGTTGACTGCTAAAATTAACAGTTTCTTAGAGTTGCGCAGAAAACATACAGAATCAGAAACCGATATATCTTCCAAACTTGCAGATGTTGAAAGACAGTTCAGTGAATGCTCTAAATCTCTACAATGGAATAAGGATAGAGTAAGGGAGCTAGAAATGAAGCTTAAGTCTATGCAAGAGGAATTAATATCAGCTAAAGATGCTGCTGCAGCTAACGAAGAGCAATTGTCTGCTGAACTTTCAACTGTCAATAAGCTTAATGAACTCTACAAAGAGAGTTCCGAGGAATGGTCAAGAAAAGCAGCTGACCTAGAGGGTGTTATAAAAGCGATGGAGTCACACCTAAAGCAAGTTGAAGATGACTACAAAGACAGACTTGAAAAGGAATTTTCTGCTAGAAAGCAGTTTGAAAAGGAGGCTGCAGATTTGAAAGAAAAGCTTGAGAAGTGTGAAGCTGATATTGAGAGAAGCAAGAAGACGAATGAACTAAGCAATCTTGCACTTACAAGCTTCTCCACTGAACCGTGGATGACACATATTGTAGCTGATAACATGGATGTAGAAAATAATGCGCTAATCTCAAAAATCCCTGTTGGGGTTTCCGGAACAGCATTAGCTGCTTCACTTTTGCGAGATGGGTGGAGCTTGGCAAAGATGTATGCAAAATACCAAGAGGCTGTTGATGCTTTGAGACACGAACAATTGGGAAGGAAGGAGTCAGAGGGAATTTTGCAACGGGTTCTATACGAGTTGGAGGAGAAAGCAGAAGCCATAGAGGAGGAGAGAGTGGAACATGAAAAGATGGCTGATGCATACTCTTTGATGAACCAAAAATTGCAACACTCCCTGAACGAAAATTCTAACTTAGAGAAAACCATCCTGGAACTGAAGGCTTACCTCAAAAGGCATGAACGTGAATATAATCTTGCCCAAAAAGAAATTGATGACCTTCGAAAACAGGTGACAGTACTTTTGAAGGAATGCCAAGACATACAAGTTCGTTGTGGGTCATTTGCTAATAATATGAATGCTAATATAACCAATACTTCTTTAAGAACAAGTTCAAATTCTGAAGCTGAAGGTGTCATATCAGAGCACCTTATAACCTTCAAGGACATTAATGGACTAGTTGAGCAGAATGTCCAACTCAGAAGCCTTGTACGCAGTCTCTCTGGACAGCTTGAAAATCAGGAGGTGGAATTCAAGGAAAAGCTTGAAATGGAACTCAAAAAACATACTGAAGAAGCTGCTTCTAAAGTTGCGGCTGTTCTGCAGAGAGCGGAAGAGCAAGGGCAGATGATTGAATCGCTTCATACTTCTGTTGCAATGTATAAAAGGTTGTATGAGGAGGAGCATAGTCTTCATTTATCTCACACCCATTCTTCAGAAGCTCTAGCAGTTGCTGCAGAAGTTGGAAGAACCAACATGAATACTTCAATTGAAAGTTCACAGGAAGTTTCTAAGAAGTCTCTCGAGAAAGCTGCAGAGCGTGTAAGATGTCTTGAGGATGATTTAGCAAAGTCTAGGAGTGAGATTATTGTATTACGTTCAGAACGTGACAAAATTGCACTAGAAGCAAATTTTGTTAGAGAGCGGCTTGATAGCTTTATGAAGGAATTTGAACACCAGAAAGCTGAAGCAAAAGGCATTTTAGCAAGAAATGTGGAATTTTCTCAGCTAGTTGTTGACTACCAACGGAAATTGCGGGAGAGTTCAGAGTCATTGAATGCTGCTGAGGAGTTTTCTCGGAAACTTTCTATGGAGTTGTCAGCATTAAAGAGTGAAAAGGAAGTCTTATCAAATGCTGAAAAGAGAGCATCTGATGAGGTTCGCAATTTATCTGAAAGGGTGTATCGCTTGCAGGGTACGTTGGGTACCATACAAAGTGCTGAAGAAGTTCGAGAGGAAGCAAGAGTTGCTGAAAGGGTAAAACAAGAAGAACATATGAAGCAACTGGAGAGGGAATGGGCTGAGGCAAAGAAAGAGTTACAGGAAGAGAGAGAAAATGTGCGGAGACTTGCGCTTGATCGGGATCAGACCATGAAAAATTCTCTAAGACAGGTTGAGGATATGGGCAAAGAGTTAACTAATGCACTAGGTGCACTTGCATCTGCAGAATCTAGGGCTGCTGTGGCTGAGGAAAAACTCTCAAGTATTCAGAAACAAATGAGTTCTGCAGATGGGAAGCTTGTCAATATGGATGCAGTAAGTGGACCTTCAATTGTATCTAGAGATGAGGTTGTTACTGAATTGCAAACAGCAAAAGAAGAGATTGAGAAACTGAAAGAAGAAGTACATGCTAACAAAGCTCACATGCTGCAGTATAAGAGCATCGCTGAGGTGAATGAAGATGCTTTGAAACAAATAGAAAGTGCACACGAGGATTACAAGACAGAGGTTGACAATACAAAGAAAGCTCTAGAAGCTGAAGTGCATTCACTTAGAGAGAAGGTTTCAGAGCTTGAAAAGGAATCCAGTTTGATTTCAGAAGCAGTGGTATCTGCAACTGCTGGAAAGGAAGAGGCTCTGACATCGGCTTTGGCTGAGATAACAAATCTTAAAGAAGAAATTTTATCCAAAGCTTCTCAAATTTCAGAGATGGAAATTCAGATATCTGGATTAAAAGAACACCTGGACAAGGAACATCAGAAATGGCGTTCATCTCAAACGAATTACGAAAGACAAGTTATTCTCCAGTCAGAGACTATTCAGGAGTTGACTAAAACATCTGAAATGCTAGCTTCACTGCAGGAGGAGGCATCTAAATTACGTAAATTAGCTGATGCTCAGAAAATTGAGAATAATGAACTAAAGGCTAAGTGGGAAGAGGAGAAGGCGAGACTTGAGAAGTCTAAGTATGATGCTGAGAAGAAATACGATGAAATCAACGAACAGAATAAAATCCTACATAGCCAACTTGAGGCATTACATATTCAATGGGCTGAGAAGGAGCGTAATGCTGCTGGTATTTCACCTGGAAGTAGTGGGGATACATTTGCCGATGTTGGTCTTCAAAATGTTGTCAATTATCTCCGACGTTCAAAAGAAATTGCAGAAACAGAGGTTTCATTGTTAAAACAGGAAAAGCTGCGATTACAGTCACAGCTTGAGGGTGCTTTGAAGGCAGCAGAATCTGCAAATGCATCTCTAGAAGCTCAGCGTGTAAAATCAAGATCATTTATGTTTACTGAAGAAGAATTCAAATCATTACAGCTTCAGGTCAGGGAAATAAACTTGCTTCGTGAGAGTAATATGCAGCTCAGGGAAGAAAATAAGCACAATTTTGAGGAATGCCAGAAATTGCGTGAACTAGCAGAAAAGGCAAGAGCTGAGAAAGAGAATCTAGAGAATCTTCTAAGGGAAAGGGAAGTTGAGCTGGAAGGTCATAAAAAAGAGATTGAAACACTAAAAATGGAAAAGGAACATCTCAATCACAAGGTTTCTGAGTTGCTTGAAAGGAGTAAAAATGTTGACGTGGAAGATTATGATCGAGTGAAGAAACTTGTAAGAGATTTGCAGGATAAACTAAGAGATAGGGATGCTCAGATTGAGGAAACTGGTAAAATTCTATCAGAAAAGCAGGAATCTTTTTCACGTCTAGAGCAAAACCTTTCAAACTGCAAATTGGAGCTTTCGGAGAAAGAGAAGAGAATTAATGAGTTCCCGAAAATTGAGGCTAACCTAAAACAGGATGCAGAAAGGAATAGGAAACTGCAGGCCCATTTTAAGAAAAGGGCTGATGTGTTATCAAGGGAAAAGGAAGACCTAGCAAAAGAGCATCAGCAGCTTTCTAAACAATTAGACGAGATTAAACAACAAGTGAAAAGATCAGCAAGTGATACAACTGGTGAACAAGCAATGAATCAAGAAAAGGACACCAGAATACAGATTCTGGAAAAAACTCTCGAAAGAGTTAGAGCTGAATTAAATAAAGAGAAGGAAGACAAATCCCTGGAAAAAAGTAGACGACTGAAAAATGAAAAGGCCATAATGGACTCTTACAACAATGTTGAGCTGGAGAAAAAACAGTTCGTTAATGAACTTGAGAGGCATAAGGAGGCTCTAAAGCGGTTGTCTGATGAAGTTGAAAAGCTTAAGATTATTGTTGGCAATATTCCCGAGGGAACCAGTGTTGCTCAACTTCTTTCGGGATCCAATGTTGATGACTTCTCTGCTCCTTATATCTCCGCTGTTGAAAATTTTGAAAAGGAAGCTCGTGCAGTAATTATTGAGTTTGGTGGCCGTAACACTCTTGGAGATGCATCAACAGTTACAGATAGTTCAGCAACTGCTACAGGTTCTCTGGTCCATACTCATGTCCCAAGCATATTACCCTCGGCGTCCCCTGTAACAAGCAGTTTGCCACCTAAGGCCACTGGAGATGGTGAGAAAAGACCTGCACCTACAAAATCTAGTATTGAAACTCGTAAAAGTGGTAGGAGATTGGTCAGGCCACGACTAGTAAAACCAGAAGAGCCACAAGGTGACACTGAAATGTCTGATGCTGAAGTACTTGGGGGCAACAAGGCTGGACCATCTAGTGACACAGAAATCCAAAGCAATTTTGCTTCATCATCTCAACCAGTGGCTCGCAAACGTGTTGCTCCTATCTCAACATCCGAATTACGTGAAGAATCTGTTGCACCTGGTGATAAGAGCTCTGATGTAATAGCACCTGTGTTAAAGAAGCCTAAAGGATCTGAGTCTCCAGAAGAGAGTGGTGAAGAACAACAACCTGCTACAACCCCAGAATTTGGTAGCAGTTATCCAGTTGCTGAAGAATCATTTGAAAGTGGTGAGTTGCCACAAGGTCAAAATGAGGAAGTCAGTGAGGCTCAAAATGATGACGAGACAGCTGTTGTGAAGGATGAAGATTCTAAAGACCCACCACACTTGGATGGCACTAGTCAAGAAGAAATACAAGCTGACAAGACTGGAATTTCAGAAGAGAATCTGGATCAACCTGCAGAAACAAAAATGATATCTGATGAGATGCAGAGGGATCATACGGAGATAGACAACCAGCAAACAACATTGCCTCTGAGTAGTGAGACAGAAGAGGGAGAGTTGTTGCAAGAATCCGGAGATCCTGAGGGTGGCTGTGACGCATCTAACATGGAAAACCAAGAATCTCGGGAGGCAACCCCTGAACCTTCCCCTGCTAGGGGTGACGATGATGCTTTAGAGGCCGGTGAGATTAATTCGCCTGAGGTTTCAGGTGATGATAAGAATGATGAAGGTGACTTGGTTGACGATGCTGCTGATGGTTCTGATAAATTAGTTGATAATGAACCTGCACCTGTTGAGAGTGATCCGGCAGCTGAGCCTGCACCTGTTGCGAGTGAGAGTAATTTGCAGAGTAGCGTTGTAGAAAGCAGTTCCTCTAAATTACCTGTTTCAAAGCAAGTGACCACTAGTGCCCCCTCTAAAACAGAAGAGGTAAAGCCATCATCACCAATTAGTGATACGTCAACAACTACCATTAATCTAACAGAGCGAGCCCGAGAGATGGCTAAATTAAGACAAGCAGGGCAAGCTGGGCCCAGTGTGTTTACCACTGCAGGAAGAGGTCGTGGAAGAGCTCCCCGAGGCCGGGTTATTCGAGGTCGTGGGCGAAGACCACCATCTAGTGATGCCTAA 6234 0.4249 MPLFISDEELSRLSGDTTAVAAKADAYIRGILNELDTVRAKADASDINAEQNCSLVEQKYLSLSSEFSKLESHAASLQSSLDQHLRDLSDAQAKNHQFQLQLVEKDREIERLKTEVSELHKSKRQLIEVNEQKDLEISEKNTTIRSYLDKIVHLTENAAQKEARFSEVEAELGRCRAACARLEQEKEIVERQNAWLNEELTAKINSFLELRRKHTESETDISSKLADVERQFSECSKSLQWNKDRVRELEMKLKSMQEELISAKDAAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGVIKAMESHLKQVEDDYKDRLEKEFSARKQFEKEAADLKEKLEKCEADIERSKKTNELSNLALTSFSTEPWMTHIVADNMDVENNALISKIPVGVSGTALAASLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEGILQRVLYELEEKAEAIEEERVEHEKMADAYSLMNQKLQHSLNENSNLEKTILELKAYLKRHEREYNLAQKEIDDLRKQVTVLLKECQDIQVRCGSFANNMNANITNTSLRTSSNSEAEGVISEHLITFKDINGLVEQNVQLRSLVRSLSGQLENQEVEFKEKLEMELKKHTEEAASKVAAVLQRAEEQGQMIESLHTSVAMYKRLYEEEHSLHLSHTHSSEALAVAAEVGRTNMNTSIESSQEVSKKSLEKAAERVRCLEDDLAKSRSEIIVLRSERDKIALEANFVRERLDSFMKEFEHQKAEAKGILARNVEFSQLVVDYQRKLRESSESLNAAEEFSRKLSMELSALKSEKEVLSNAEKRASDEVRNLSERVYRLQGTLGTIQSAEEVREEARVAERVKQEEHMKQLEREWAEAKKELQEERENVRRLALDRDQTMKNSLRQVEDMGKELTNALGALASAESRAAVAEEKLSSIQKQMSSADGKLVNMDAVSGPSIVSRDEVVTELQTAKEEIEKLKEEVHANKAHMLQYKSIAEVNEDALKQIESAHEDYKTEVDNTKKALEAEVHSLREKVSELEKESSLISEAVVSATAGKEEALTSALAEITNLKEEILSKASQISEMEIQISGLKEHLDKEHQKWRSSQTNYERQVILQSETIQELTKTSEMLASLQEEASKLRKLADAQKIENNELKAKWEEEKARLEKSKYDAEKKYDEINEQNKILHSQLEALHIQWAEKERNAAGISPGSSGDTFADVGLQNVVNYLRRSKEIAETEVSLLKQEKLRLQSQLEGALKAAESANASLEAQRVKSRSFMFTEEEFKSLQLQVREINLLRESNMQLREENKHNFEECQKLRELAEKARAEKENLENLLREREVELEGHKKEIETLKMEKEHLNHKVSELLERSKNVDVEDYDRVKKLVRDLQDKLRDRDAQIEETGKILSEKQESFSRLEQNLSNCKLELSEKEKRINEFPKIEANLKQDAERNRKLQAHFKKRADVLSREKEDLAKEHQQLSKQLDEIKQQVKRSASDTTGEQAMNQEKDTRIQILEKTLERVRAELNKEKEDKSLEKSRRLKNEKAIMDSYNNVELEKKQFVNELERHKEALKRLSDEVEKLKIIVGNIPEGTSVAQLLSGSNVDDFSAPYISAVENFEKEARAVIIEFGGRNTLGDASTVTDSSATATGSLVHTHVPSILPSASPVTSSLPPKATGDGEKRPAPTKSSIETRKSGRRLVRPRLVKPEEPQGDTEMSDAEVLGGNKAGPSSDTEIQSNFASSSQPVARKRVAPISTSELREESVAPGDKSSDVIAPVLKKPKGSESPEESGEEQQPATTPEFGSSYPVAEESFESGELPQGQNEEVSEAQNDDETAVVKDEDSKDPPHLDGTSQEEIQADKTGISEENLDQPAETKMISDEMQRDHTEIDNQQTTLPLSSETEEGELLQESGDPEGGCDASNMENQESREATPEPSPARGDDDALEAGEINSPEVSGDDKNDEGDLVDDAADGSDKLVDNEPAPVESDPAAEPAPVASESNLQSSVVESSSSKLPVSKQVTTSAPSKTEEVKPSSPISDTSTTTINLTERAREMAKLRQAGQAGPSVFTTAGRGRGRAPRGRVIRGRGRRPPSSDA 2077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02091 2077 Coils Coil 893 920 - -
Trre11g02091 2077 Coils Coil 74 129 - -
Trre11g02091 2077 Coils Coil 787 814 - -
Trre11g02091 2077 Coils Coil 689 709 - -
Trre11g02091 2077 Coils Coil 1388 1415 - -
Trre11g02091 2077 Coils Coil 446 469 - -
Trre11g02091 2077 Pfam TPR/MLP1/MLP2-like protein 1047 1174 IPR012929 GO:0006606
Trre11g02091 2077 Gene3D - 870 1032 - -
Trre11g02091 2077 MobiDBLite consensus disorder prediction 1640 2077 - -
Trre11g02091 2077 MobiDBLite consensus disorder prediction 1813 1844 - -
Trre11g02091 2077 Coils Coil 299 358 - -
Trre11g02091 2077 Coils Coil 1213 1251 - -
Trre11g02091 2077 Coils Coil 840 881 - -
Trre11g02091 2077 MobiDBLite consensus disorder prediction 1661 1694 - -
Trre11g02091 2077 MobiDBLite consensus disorder prediction 1978 2030 - -
Trre11g02091 2077 MobiDBLite consensus disorder prediction 1710 1731 - -
Trre11g02091 2077 Coils Coil 1268 1288 - -
Trre11g02091 2077 Coils Coil 1532 1566 - -
Trre11g02091 2077 Coils Coil 484 532 - -
Trre11g02091 2077 Coils Coil 1444 1478 - -
Trre11g02091 2077 Coils Coil 1104 1177 - -
Trre11g02091 2077 Coils Coil 942 969 - -
Trre11g02091 2077 Coils Coil 984 1022 - -
Trre11g02091 2077 MobiDBLite consensus disorder prediction 1854 1869 - -
Trre11g02091 2077 Coils Coil 144 199 - -
Trre11g02091 2077 Coils Coil 239 273 - -
Trre11g02091 2077 Coils Coil 1486 1520 - -
Trre11g02091 2077 Coils Coil 1048 1082 - -
Trre11g02091 2077 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2063 - -
Trre11g02091 2077 MobiDBLite consensus disorder prediction 1870 1886 - -
Trre11g02091 2077 Coils Coil 1296 1351 - -
Trre11g02091 2077 Coils Coil 600 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02091 Trre-Chr11 23679237 23706748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02091 K09291 - gmx:100811882 2789.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g02091 11 23679237 23706748 Trre11g02091 11 23679237 23706748 ECH