Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02084 ATGGGTGGACCTGTTGGAAATCCGGAAAGCATGTCAAAAGCATGGAGAAGTCTTAGTTACAGTCTGCAATCAACTCTTGGTAGCATGGTTTTGCCACTCGGTTCTTTGACTACTGGATTAGCTCGGCATCGAGCATTGTTATTTAAGGTTCTAGCTGATAGTTTGAGTATTCCATCACGGTTGGTGAAAGGAAAGCAATATACAGGTTCTGATGATGCGGCAATTAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGATCTAATGGCAGATCCCGGAACTCTTATTCCATCGGATGCTACTGGATCATGTATTGAGTACGATGAATCATTTTTTGCGGCAAGTTCTTCATCAAGAGACCTCGATTCATCTCGTGTAGAATCGTATAGCAGTGGAGTTGGAAGTTCATCGGAAGAAACTTCAGATTTTGGGATGTCAAACACCGTAAACAGATCAAAACAACATAATGTCAAGAAGATTGTAGAGCAGGAAACTCAAGGAAGACCTAATCATCGATATGTTCATGCAAGATCATCTTCTTGGAGTGAAGGGATCAGTTCCTCCGTAGCAATCAGAATGAAAGCCAAAAAGGTTTCTCAATTTATGATTGATACTGCCAAGGAAAACCCTCACTTAGCTCAGAAGCTTCATGATGTTTTACTTGAAAGTGGCGTTGTTCCGCCACCAAATTTATTTTCTGACAATTATCACGAGGAATTAGTTTCCTCAACCGAAGAGAAAAATGTACAAAAACAAGGAAGTGAACATCAAGAAGTGGAATTTGATGATAATCTCGGTCCTTCTATGCCTGTAGAAGGTTTAGGAACTAACCTTCCTCTTCATACAAGGGAAGAATTTGGAAAATTTATACCAACTCAGGTAAAATATGGGAGAAAGGTACCAGTTTCTGCAGCAGCAGCTGCAGCGGCTGCGGTTGTTGCATCTTCTATGGTAGTTGCTGCAGTGAGGTCAAGCACTGACTCCAACATCGAGCTTTCAGTCTCGGCTGCTGCAGCCGCTACTGCTGCAGCTGTAGTAGCAACCACTTCTGCAGTGAGTATGTATGAGCATAGCAGTCGAAGTGATGGGGATACTGAAAGTTGTGGAACAAATTTGGATGTCGAGAGAAGATCTGGTAGCTCAGTTGTAAGTAATGACAGTACAAAGTCTGATTGTTCTTCTCTAGACGATGTTGCGGAGCATGAAATACATTGGGAGGAAATCACACTTGGGGAACGTATTGGACTCGGATCTTATGGGGAGGTGTATCGTGGTGAATGGCGAGGAACTGAAGTTGCTGTAAAGAGATTTCTAAATCAAGATATATCCGGTGAAGCACTTGAAGAATTCATAAGTGAGGTCAGAATAATGAAAAGGTTGAGGCATCCAAATGTGGTTCTCTTCATGGGAGCAGTAATTCGACTTCCAAATCTTTCAATTGTTACTGAATTTCTTCCAAGAGGAAGTTTGTATAGATTAATTCATCGGCCAAACAATCAATTAGACGAGCGAAGGCTTTTGAAAATGGCCCTTGATACTGCTCGAGGAATGAACTATTTGCACAACTGCAGTCCGGTGATAGTGCATCGGGATTTGAAGTCTCCAAATCTTCTTGTTGATAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCTTATCGCGTATGAAGCATAGCACATTCCTTTCTTCAAGATCAACTGCAGGAACAGCCGAGTGGATGGCTCCCGAAATGTTGAGAAATGAACCGTCAAATGAAAAGTGCGATGTTTATAGCTTTGGGATCATATTATGGGAGCTGTTTACTTTGCAGCAACCTTGGAGAGGAATGAATTCAATGCAAGTTGTCGGTGCAGTGGGTTTTCAACATCGCCGTCTTGACATTCCTGATGACATGAGTCCTGCCATTGCAGATATTGTCAGGAGATGCTGGCAGACGGATTCAAAGTTGAGACCAACATTTGCTGAAATATTGGCAGCTCTAAAGCCGTTACAGAAACCAATTGTCGGTTCTCAAGTGCCTCGGCCAGTTGCATCAGGTAGGCACGGGAAGGTTCAATCATCAGCTGCCGAAAGATAG 2082 0.4241 MGGPVGNPESMSKAWRSLSYSLQSTLGSMVLPLGSLTTGLARHRALLFKVLADSLSIPSRLVKGKQYTGSDDAAINFVKIDDGREYIVDLMADPGTLIPSDATGSCIEYDESFFAASSSSRDLDSSRVESYSSGVGSSSEETSDFGMSNTVNRSKQHNVKKIVEQETQGRPNHRYVHARSSSWSEGISSSVAIRMKAKKVSQFMIDTAKENPHLAQKLHDVLLESGVVPPPNLFSDNYHEELVSSTEEKNVQKQGSEHQEVEFDDNLGPSMPVEGLGTNLPLHTREEFGKFIPTQVKYGRKVPVSAAAAAAAAVVASSMVVAAVRSSTDSNIELSVSAAAAATAAAVVATTSAVSMYEHSSRSDGDTESCGTNLDVERRSGSSVVSNDSTKSDCSSLDDVAEHEIHWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLNQDISGEALEEFISEVRIMKRLRHPNVVLFMGAVIRLPNLSIVTEFLPRGSLYRLIHRPNNQLDERRLLKMALDTARGMNYLHNCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVYSFGIILWELFTLQQPWRGMNSMQVVGAVGFQHRRLDIPDDMSPAIADIVRRCWQTDSKLRPTFAEILAALKPLQKPIVGSQVPRPVASGRHGKVQSSAAER 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02084 693 CDD STKc_MAP3K-like 416 662 - -
Trre11g02084 693 MobiDBLite consensus disorder prediction 126 150 - -
Trre11g02084 693 MobiDBLite consensus disorder prediction 673 693 - -
Trre11g02084 693 SUPERFAMILY Protein kinase-like (PK-like) 387 661 IPR011009 -
Trre11g02084 693 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 147 667 - -
Trre11g02084 693 PRINTS Tyrosine kinase catalytic domain signature 523 541 IPR001245 GO:0004672|GO:0006468
Trre11g02084 693 PRINTS Tyrosine kinase catalytic domain signature 589 611 IPR001245 GO:0004672|GO:0006468
Trre11g02084 693 PRINTS Tyrosine kinase catalytic domain signature 570 580 IPR001245 GO:0004672|GO:0006468
Trre11g02084 693 PRINTS Tyrosine kinase catalytic domain signature 484 497 IPR001245 GO:0004672|GO:0006468
Trre11g02084 693 PRINTS Tyrosine kinase catalytic domain signature 633 655 IPR001245 GO:0004672|GO:0006468
Trre11g02084 693 Pfam Ethylene-responsive protein kinase Le-CTR1 1 98 - -
Trre11g02084 693 FunFam Serine/threonine-protein kinase isoform 1 401 488 - -
Trre11g02084 693 ProSiteProfiles Protein kinase domain profile. 410 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02084 693 Pfam Protein tyrosine and serine/threonine kinase 410 661 IPR001245 GO:0004672|GO:0006468
Trre11g02084 693 Gene3D Transferase(Phosphotransferase) domain 1 489 671 - -
Trre11g02084 693 Gene3D Phosphorylase Kinase; domain 1 403 487 - -
Trre11g02084 693 FunFam PAS domain-containing protein tyrosine kinase family protein 488 675 - -
Trre11g02084 693 ProSitePatterns Protein kinases ATP-binding region signature. 416 437 IPR017441 GO:0005524
Trre11g02084 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Trre11g02084 693 MobiDBLite consensus disorder prediction 357 390 - -
Trre11g02084 693 SMART serkin_6 410 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02084 Trre-Chr11 23562044 23566435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02084 1 680 MAP Kinase Kinase Kinase AT1G73660 61.570 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trre11g02084 PK_Tyr_Ser-Thr 1.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02084 - - psat:127107393 1090.1