Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02044 ATGGTCTTCAAAGGAAGATTCTTCTCTTCCAAAAAATCTGAAACTTCTAGTCCAGATGCTTCTTCTAACAGTCCTCGATCAATCTCCTCAAATTCTCCTTCTAGATCTGATAAGAAAAAAGCTAAATCAACCGTTACTCAAATCCTAAACTCCGCCGGAACAACCACCAGCGGCGGCGGAGGAAGCGGCGGCGGATTTCTCGGATCATCGGCTTCTAGTCGGAAGACGCAAATTAAAGAAGGGAGTAAGAAGAAAGATGTTGTTAAAGGAAAGGAGAGTGAGATTTCGAATCTGTTGGAATCTCGCTCTCGTTCTGGTTCTGGTTCGAAGAAATTGACTCCGGCAACGGCGGTGGAGGTGAAGGAGTTACCGTCGCCGTATTCTTCTTCATCATCGACGGCTGCGGCTTCTGTTTCGCCGATTTTGGCGTCGTCGTTAGGGTTGAATAGGATAAAGACGAGATCGGGACCGTTACCGCAGGAGAGTTTTTTTGGTTTTAGAGGTGATAAGGGAGGAGCTACGGCGGCAGTGCTTGGTGCTAGTAATCTTTCTAAGCCTGGTGTTGGGAAGAAGAAGGAGGTTGGGAATCAGAATAGAGTAGGGTTTCGGGAAGGTTTGGTAATTGGTGGTAGTGTTGATAATGGGAGTAGTTTGGATAGTTTGTCGTCGGGGAGTGGTGTACATTCGATGGATCAGAGTCCGGTTGTGTTGCCGCGGTCGCGGTTACAGAATGGTGAATCTTCTTCTGAAACAGGAGAGCAGACATCATCACAGACCCAGACTGGAGGCTTAAGAAGTGAAGATGTTTGCACCCCAGAGACTGCATATGATTTTGAAAATCCAAAAGAATCCGAATCTCCCCGTTTTCAAGCTATATTACGTGTCACAAGTGCCCCCGGAAAGAGGTTTCCTGGTGATATCAAGAGTTTTTCCCACGAGTTAAATTCTAAAGGTGTCCGGCCCTTTCCATTTTGGAAGCCTCGGAGGTTAAATAATAACCTTGAGGAGATCTTGGTTGTTATTAGGGCTAAATTTGATAAAGAAAAGGAAGAGGTGAACTCTGAACTGGCTATTTTTGCAGCAGACCTGGTTGGAGTTCTTGAAAAAAATTCAGACAATCATCCGGAATGGCAAGAGACAATTGAAGACTTGCTAATTTTGGCCAGACGCTGTGCTATGACTACATCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGATTTGGATGATAGACGTCAAGAGCTACCTCCAGGGACGCTAAAGCAACTTCACACTCGAATGCTCTTCATTCTCACACGGTGTACTAGGTTGTTGCAATTCCACAAGGAAAGTGCATTGGCTGAGGATGAACACGTTTTCAACCTTCGTCAATCCAGAGTCTTGCATACTACTGGAAAAAGTATTCCTCCTAGTGGGGGAAGGGATTCTAAAAGTTTTGGTGTTGCAAAGACCTCAAAAGCTTCAACCAAAAAAGCTTATAGCCAAGAGCAGAGTAGCTTGGTTTGGAAGAAAGGTGTTATGAAACCAGAAATTCAGTTGCCTGCTGCCGATGATGATACTTTAAAAAGCTTCGAGTCTCCTTCTGGCAGGAATCGGATGGCTTCATGGAAAAAATTCCCATCTCCATCAGGAAAAAGTCCTACAGAAACTGTTCAGTTGAAGGACCAAAGTTATGAGACCGTTGAACCTTCAAAGACACCTGATAAGAGATTAACTTCTGATATAGATCTCTCTTCTGCAAAGCCGTCTGAGCTTCTCGCTGTCAAAGATTCCCATGACCATGCTTCCAAACACCAACACAAACCTTCTTGGGGATACTGGGGAGACCAGCCAGTTAGTAATGACGATAGTTCAATAATTTGTCGAATATGCGAAGAGGATGTACCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGACAGATGTGATCAGAAGGGTCTGAGTGTCAACGAGCGTCTTTTAAGAATTTCTGAAGCACTATCATCTGCTCAGAAGGATTCCCAACAAATGCTTGGAAGTCCCGATGTTGCAAAAGTGTCAAATTCAAGTATGACTGAAGAATCCGATGTTCTTTCCCCTAAACTTAGCGATTGGTCGCGCAGAGGCTCAGAGGATATGCTAGACTGCTTCCCTGAAACGGATAATTCGGCTTTTATGGATGACCTAAAAGGATTGCCACTTATATCATGTAGAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCGGGGAAGGGTGCTTATTCCGAAAATGATGATCTGCCACAGATGAATGAACTTGCTGATATAGCACGATGTGCAGCCAATGCTAGTCTGGATGATGATCGCACGGCGTCGTATTTATTATCTTGTCTTGATGACTTGAGGGTTGTTGTAGAACGAAGGAAGTCCGATGCACTTACTGTTGAAACCTTTGGAACACGCATTGAGAAGCTGATTCGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTTGAAAAAATAGATGTAGAGAGCCCTGTGATGGATGATGATGTCATCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATTCATTCTTCAAAGGATCGTACCTCTATTGACGACTTTGAGATTATAAAACCTATCAGCCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAGAAGAGGACAACTGGTGATCTCTTTGCAATAAAGGTTCTTAAGAAGGCAGATATGATCCGCAAGAATGCTGTAGAAAGTATATTAGCGGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGATTTTTCTATTCTTTTACATGTCGTGAGAACTTGTATCTTGTCATGGAGTATCTGAATGGTGGAGACTTATATTCATTACTAAGGAATTTAGGTTGTCTAGATGAGGAAGTTGCCCGTGTATATATTGCTGAAGTGGTGCTCGCATTAGAGTATTTGCACTCACTGCGTGTGGTGCATCGTGACTTGAAGCCTGACAATTTATTGATCGCACATGATGGTCACGTCAAGTTAACAGACTTCGGTCTTTCAAAAGTTGGTCTCATCAACAGCACGGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCTCTACTTGGGGAGGATGAATCTCATACATTTACATCTGAGGATCAAAGGGAACGGAGGAAGAAACGTTCTGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATGCGTACACTGCGGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCATTCAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAACCGTAAGATACCTTGGCCTGAAGTTCCTGATGAAATGAGTCTTGAAGCACATGATCTTATTGATCGATTGTTGACAGAAGATCCTAATCAAAGACTAGGAGCTAGAGGCGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAATTGGGACACGCTAGCCAGACAGAAGGCTGCATTTGTTCCTACTTCTGAGAGTGCTCTAGACACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGCATATCCGCCAAGTGATTTTGAAGATTCTAGTGATAATGATAGCTTAAGTGGCAGCAGCAGTTGCCTGAGCAATCGTCATGATGAAGTGGGAGATGAATGTGGGGGTCTTGCCGAGTTTGATTCTAGTTCTTCTGTCAATTACTCTTTCAGTAATTTCTCCTTTAAGAATCTCTCCCAACTTGCATCAATCAATTATGATCTCACCAAGGGATGGAAAGATGATCCCTCAACAAATTCTAGTGCATAG 3933 0.4361 MVFKGRFFSSKKSETSSPDASSNSPRSISSNSPSRSDKKKAKSTVTQILNSAGTTTSGGGGSGGGFLGSSASSRKTQIKEGSKKKDVVKGKESEISNLLESRSRSGSGSKKLTPATAVEVKELPSPYSSSSSTAAASVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGGATAAVLGASNLSKPGVGKKKEVGNQNRVGFREGLVIGGSVDNGSSLDSLSSGSGVHSMDQSPVVLPRSRLQNGESSSETGEQTSSQTQTGGLRSEDVCTPETAYDFENPKESESPRFQAILRVTSAPGKRFPGDIKSFSHELNSKGVRPFPFWKPRRLNNNLEEILVVIRAKFDKEKEEVNSELAIFAADLVGVLEKNSDNHPEWQETIEDLLILARRCAMTTSGEFWLQCESIVQDLDDRRQELPPGTLKQLHTRMLFILTRCTRLLQFHKESALAEDEHVFNLRQSRVLHTTGKSIPPSGGRDSKSFGVAKTSKASTKKAYSQEQSSLVWKKGVMKPEIQLPAADDDTLKSFESPSGRNRMASWKKFPSPSGKSPTETVQLKDQSYETVEPSKTPDKRLTSDIDLSSAKPSELLAVKDSHDHASKHQHKPSWGYWGDQPVSNDDSSIICRICEEDVPTSHVEDHSRICAVADRCDQKGLSVNERLLRISEALSSAQKDSQQMLGSPDVAKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPETDNSAFMDDLKGLPLISCRTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSENDDLPQMNELADIARCAANASLDDDRTASYLLSCLDDLRVVVERRKSDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDVESPVMDDDVILEDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHVKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDESHTFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPEVPDEMSLEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNTSDGLAYPPSDFEDSSDNDSLSGSSSCLSNRHDEVGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02044 1310 PANTHER SERINE/THREONINE-PROTEIN KINASE 601 1282 - -
Trre11g02044 1310 ProSiteProfiles Protein kinase domain profile. 899 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02044 1310 MobiDBLite consensus disorder prediction 9 32 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 213 267 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 123 137 - -
Trre11g02044 1310 ProSiteProfiles AGC-kinase C-terminal domain profile. 1189 1293 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trre11g02044 1310 Gene3D Phosphorylase Kinase; domain 1 897 1217 - -
Trre11g02044 1310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1018 1030 IPR008271 GO:0004672|GO:0006468
Trre11g02044 1310 Pfam Protein kinase domain 899 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02044 1310 MobiDBLite consensus disorder prediction 543 562 - -
Trre11g02044 1310 SUPERFAMILY Protein kinase-like (PK-like) 896 1232 IPR011009 -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 1233 1252 - -
Trre11g02044 1310 Gene3D Transferase(Phosphotransferase) domain 1 983 1206 - -
Trre11g02044 1310 SMART serkin_6 899 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02044 1310 MobiDBLite consensus disorder prediction 77 98 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 742 764 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 592 611 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 563 577 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 1 137 - -
Trre11g02044 1310 FunFam probable serine/threonine protein kinase IREH1 897 986 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 515 579 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 43 76 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 1236 1252 - -
Trre11g02044 1310 Coils Coil 331 351 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 1060 1088 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 213 269 - -
Trre11g02044 1310 MobiDBLite consensus disorder prediction 1071 1088 - -
Trre11g02044 1310 CDD STKc_MAST_like 905 1193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02044 Trre-Chr11 22896859 22909103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02044 65 1304 AGC Kinase Gene Family AT3G17850 66.693 0.0 1622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Trre11g02044 Pkinase 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02044 - - tpra:123913507 2344.7