Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02036 ATGATTGCCCCATCAGACGCTGCTGGCATGAAGACACTGATCATGGCTGGGAGTAGATCTATTGATTTAGAGCTGACAACATTATCAAGTGCGAATCACATCGAAATGACTCCAACTGATGCAGGCTTTCAGGACAGATACATTGTACAAGAAATAATCAAAGAAATGACTAAGAATAGACCCATTGATACTAAAGGGAAGAAAGGATTTAAAGATGATACCACAATGTTTTGGGGAGTTAAATCCTACAATGATCTACTTATGCAAGCCGATCCTACTGGTTATGCTCAAACCGAGTTGTTTTTTTCAAAAGGACAAATCGATGTTTACTTTCAGAAGCGGCTGAGCCTTCCGAGGACAATCTACTTCAATGGCGACAGTTGTGTAATGCCACCACCCAATGATTCTCTAGTGTTACCGAATGCGGGTACAAAACTCCAAGCTCACTTTTTTGCTTGGATGATGGTTTTGGACTTTTGGTGGTAG 486 0.4115 MIAPSDAAGMKTLIMAGSRSIDLELTTLSSANHIEMTPTDAGFQDRYIVQEIIKEMTKNRPIDTKGKKGFKDDTTMFWGVKSYNDLLMQADPTGYAQTELFFSKGQIDVYFQKRLSLPRTIYFNGDSCVMPPPNDSLVLPNAGTKLQAHFFAWMMVLDFWW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02036 161 PANTHER PROTEIN COBRA 71 155 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02036 Trre-Chr11 22750313 22754678 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02036 16 71 Core DNA Replication Machinery Family AT5G27740 87.500 5.25e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02036 K10756 - gmx:100807039 99.3673