Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02034 ATGCTAGCTTTAGTCATTGCAATTTCACTTTTAAGAGAAATTAATATTGTACACTCACATTTCGTTTTTCTACGTGGTTACAGTCCAACTGCGCCGATTAGTAACACCGTTGGAGAGAATGATGACAATCCTTCGGTTCAATGTACACCCCATATGTGTCCCATACAAGTAAACTGGCATATTAAGGAAAACTACAAGGAGTATTGGCGAGTAGAGATCACAATTACGAACTATAATCGTTTGGTGAATTATACGGATTGGAGTTTAATTGTTCAACATCCAAATTTTGACAATCTGACTCAATCTTTCGGTTTCAATTACAAATCAATATCCACTAACGAGTTGTTAAATGATACAACATTGTTGTGGGGAGTTAAATCCTACGATAATTTACTAATGGAAGCCGGTCGTAATAGCGGCGATGTACAAGCGGAGTTACTATTTCACAAGCATAAATCTTTTTCTTTGTCAAATGGTTGGCCGTTTCCTTGGAGGGTCTATTTCAATGGTGATAATTGTGCGATGCCACCACCTGGTGTTTATCCTCATGATAATCCATTAATTGATATCGGGTCTAAGCAAGAGATTGCATTGTTTTCAATTCAAGTTTATGCTTATAGTTATTCACTTATTTTAATAGTGAAGCTAGATAATTAA 657 0.3592 MLALVIAISLLREINIVHSHFVFLRGYSPTAPISNTVGENDDNPSVQCTPHMCPIQVNWHIKENYKEYWRVEITITNYNRLVNYTDWSLIVQHPNFDNLTQSFGFNYKSISTNELLNDTTLLWGVKSYDNLLMEAGRNSGDVQAELLFHKHKSFSLSNGWPFPWRVYFNGDNCAMPPPGVYPHDNPLIDIGSKQEIALFSIQVYAYSYSLILIVKLDN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02034 218 PANTHER PROTEIN COBRA 39 184 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02034 Trre-Chr11 22744440 22745864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02034 44 200 COBRA Gene Family AT5G60920 57.595 7.42e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02034 - - pop:7480590 225.328