Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02033 ATGGGAGCACAGGCAACAGAAAAAGGAAATTGTTCGAAATTTGGAGGAATAACAATAGATTCCTGTAAAACACATCCCACAATCATTGATTCAATTCCCGGAGATGTTGATGAAAAAGATATTGGAAATTGCTGCAAAGGTGGTGTACTTAGTGCATGGTCACAAGATCCAACAAAAGCTGTTTCATTATTTCAAATCAACGTAGGAGTTAACCACCCTCGCAAAACTTTAAAGGTGTCGCCGCAGAACTTCACCTTTAAAGTATCAGGACAAGACTATACTTGTGAACCGACAAAAATCGTGAAACCAACTCGCTATACATACAAAAAGATGGTATCGCATGCATTGATGACATGGACTGTGAAATGCACATTTTCATAA 381 0.3832 MGAQATEKGNCSKFGGITIDSCKTHPTIIDSIPGDVDEKDIGNCCKGGVLSAWSQDPTKAVSLFQINVGVNHPRKTLKVSPQNFTFKVSGQDYTCEPTKIVKPTRYTYKKMVSHALMTWTVKCTFS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02033 126 PANTHER PROTEIN COBRA 1 126 IPR006918 GO:0010215|GO:0016020
Trre11g02033 126 Pfam COBRA-like protein 1 126 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02033 Trre-Chr11 22741646 22744312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02033 2 126 COBRA Gene Family AT3G02210 52.344 1.37e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02033 - - gmx:100783820 140.969