Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02029 ATGTGTTGCAGACCACACTGGTTCTGGTGCTTATATTGCACAATCTGCGGAGTTGTGTTCTTTTTCGTCATGTTCTCAATCATCGTCTGGATAGTAATCTCCCCCACAAGTGTAAAATTCCACGTAACCGATGCTACTCTCTCCGAGTTCAACCTCACAAATAACAACAACACATTATATTACAATTTCAAACTAAACGTTACACTACGAAACCCCAATAACAACATCATAGTCTATTATCGAAGAATCACCGCAATTGCTTGGTACAAAGACAATGATTTTAGTTATTTGAGTTTGACACCCTTTGATCAAGGACACAAGAATACCACTTTTCTTGGACCTATAGAGTTTAAAGGGTATACAGGGTTCAAACTTGGACGTAAACAACTTGACGAATATTTTGAAGAGACGCGTCTTGGGGTTTATAATGATTTGGCTGTTGATTTCGATGTTAGAATTAGAGCTAAATTTGGAAGCTTTTATAAAACTGGTCGTTTTAATCCACCAGTTGTGCAGTGTCGTCGTTTGAGAGTTCCTTTAGTTTCGTCTAAAGGAACTAACTCATCATCAACATTTTCTTTTAGTGACAGAAGATGTAGTAGTGGCTCTTTCTTTACCGATCGTGATGCAGATGCAGGAGCTTAA 645 0.3814 MCCRPHWFWCLYCTICGVVFFFVMFSIIVWIVISPTSVKFHVTDATLSEFNLTNNNNTLYYNFKLNVTLRNPNNNIIVYYRRITAIAWYKDNDFSYLSLTPFDQGHKNTTFLGPIEFKGYTGFKLGRKQLDEYFEETRLGVYNDLAVDFDVRIRAKFGSFYKTGRFNPPVVQCRRLRVPLVSSKGTNSSSTFSFSDRRCSSGSFFTDRDADAGA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02029 214 PANTHER OS05G0367900 PROTEIN 10 183 IPR044839 GO:0098542
Trre11g02029 214 Pfam Late embryogenesis abundant protein 66 166 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02029 Trre-Chr11 22680574 22681218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02029 32 181 SNARE and Associated Proteins AT1G32270 30.000 7.77e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02029 - - gmx:100783747 241.891