Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02028 ATGTGTTTCAGTTTTCGTTGCTTCATCTGCCTCTATTGTACAATCTACACGGTTATATTCTTCTTCGTGGCTTTCACAACCGTCCTTTGGATAGTAATCTCTCCATCAAGTGTGAAATTCCACGTAACCGATGCTACTCTCACCGAGTTCAACATTACGAATAACAATACCTTATATTACAATTTCAAAGTCAATGTCACCGCACGAAACCCAAACAATAACATCATAGTCAATTATCGACAAATTACTGCAATTGCTTGGTACAAAGATAACGATTTTGGTTATGTGAGTTTGACACCCTTTGATCAAGGACACAAAAATACCACATTTCTTGGGCCAATTGTATTCAATGGGAGCCGTGCAATCAAACTTGGACATCAACAACTTGACGAGTATTTTGAAGAGACACGTCTTGGAAATTATAATGATTTGGCTGTTGATTTTGATGTTCAAATTAAAGCTAAATTTGGACGCTTTAAAAGTGGTCGGTTTAGTCCACCAATTGTGCAATGTAGTCGTTTGAGAGTTCCTTTAGTTTCACCTTCCAATAGTACTCACTCATTATCATCATTTTCTTTTAGTGAAAGAAGATGTAGCAGCGGTTCTTTCTTTACGGATCGTAATGCAAATGCCGGAGCTTGA 642 0.3754 MCFSFRCFICLYCTIYTVIFFFVAFTTVLWIVISPSSVKFHVTDATLTEFNITNNNTLYYNFKVNVTARNPNNNIIVNYRQITAIAWYKDNDFGYVSLTPFDQGHKNTTFLGPIVFNGSRAIKLGHQQLDEYFEETRLGNYNDLAVDFDVQIKAKFGRFKSGRFSPPIVQCSRLRVPLVSPSNSTHSLSSFSFSERRCSSGSFFTDRNANAGA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02028 213 PANTHER OS05G0367900 PROTEIN 8 181 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02028 Trre-Chr11 22673148 22673789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02028 32 185 SNARE and Associated Proteins AT1G32270 29.114 3.14e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02028 - - gmx:100784278 258.84