Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02023 ATGTTTTACTTGCCAAAACATGATGAGATTGGAAAAATTCTGAAAGTGGAATGTACTCCCACATTAGGAGAGACAGATGTCTTTGGTTTTTTCAGGCTTGGGTGGCTGCTCCGTTTCATTAGCCATTCTGTAATCTCTGGCTTTACATCTGCTTCAGCTATTGTGATTGGTTTATCTCAAGCAAAGTACTTTTTGGGGTACGATATAGACAGAAGTAGCAAGATTATACCGTTAGTTAAAAGTATAATAGCTGGAGCTGATAAGTTTTCATGGCCCCCTTTTGTATTGGGATCAATTATGCTTGCAATACTTCTTGTCATGAAACACCTGATGCCAAATAAAGCTACAGAAAAGGCTTCCAAGAATCATAAATTAAAACATCTCAAACGTTCAAGTCAACAAATGTCATCTCATGATGCAACTCCTCATACTATGCCATCAACTACTAGGACATCTAATGGCACACACACTAATACTGCTCCTCATATAAGGGAGTCTGCTGCTAGGACATCTAATGACCCTCCTCCTCACGTTGCAACTGCATCTAGGACATCTAATATCCCACCTCCTGAAGTTGCATCTACTGTTAGGACATCAAATGTTCCACATCATCATGTTCCTCATGCTTCATGTGCTACTAGGACATCAAATATCATACCTCCATTTAGTTCACAACCATGTGATTCTGAGACACAAAGTAGTGGCGGAAAGCAAACTTTAATACTTGAGTTACAGGGATTTTTGCCTTCGTATGCTGCAGCTAATGAGATTGGAGATATCATGAGGAGTAATTATAGTCAGCCATGGTACTCATGGAAAAAGATAGACACTGACACAATAGACTTATGGTTTAAAGCTTTTAAGACAAAGTTTAAATTTTGTCCGCCGAATGATGCATGGGCTAGAAAGAACTTTGAAAGACGAGGTGCAGCAATAATGAAAAATAACTTAAGCAAGGTTCGTCTCGCAAGGAAAAGACCAAGTTGGATTTCTCAAAAACTGTGGAAGACATTAAATGAGCATTGGAAAACTCCAGATTATAAAAAGAAGCGTATGCAGGCGAAAACAAATAGAGCATCTGACCGTGACGGTTTTGGAAAGCCCCTTCACACTTGTGGCTCTATCACCACATCACAACATAGAGCTAATTTGACGGAAACGAATGGCACTCCCCCCCGATCCCGTAGATTTGTTTGTTTACACACACCAACATCGCAAGAATAA 1224 0.3979 MFYLPKHDEIGKILKVECTPTLGETDVFGFFRLGWLLRFISHSVISGFTSASAIVIGLSQAKYFLGYDIDRSSKIIPLVKSIIAGADKFSWPPFVLGSIMLAILLVMKHLMPNKATEKASKNHKLKHLKRSSQQMSSHDATPHTMPSTTRTSNGTHTNTAPHIRESAARTSNDPPPHVATASRTSNIPPPEVASTVRTSNVPHHHVPHASCATRTSNIIPPFSSQPCDSETQSSGGKQTLILELQGFLPSYAAANEIGDIMRSNYSQPWYSWKKIDTDTIDLWFKAFKTKFKFCPPNDAWARKNFERRGAAIMKNNLSKVRLARKRPSWISQKLWKTLNEHWKTPDYKKKRMQAKTNRASDRDGFGKPLHTCGSITTSQHRANLTETNGTPPRSRRFVCLHTPTSQE 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02023 407 MobiDBLite consensus disorder prediction 116 207 - -
Trre11g02023 407 MobiDBLite consensus disorder prediction 173 201 - -
Trre11g02023 407 Pfam Plant transposase (Ptta/En/Spm family) 332 393 IPR004252 -
Trre11g02023 407 Pfam Sulfate permease family 27 114 IPR011547 GO:0016020
Trre11g02023 407 PANTHER SULFATE TRANSPORTER 27 112 IPR001902 GO:0016020|GO:0055085
Trre11g02023 407 MobiDBLite consensus disorder prediction 134 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02023 Trre-Chr11 22633453 22638065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02023 27 110 Inorganic Solute Cotransporters AT5G13550 78.571 1.27e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02023 - - tpra:123913621 306.605