Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02010 ATGGAATCTAAGATGAATAGTTTTGTTGATGATGAGAAGTACAAACAAGATGATCAAGATTTGGAATTAGAACAAGAAGTTGGTGGTGGCCATGAACATGATCATCAAGAGGAAAATAGTGAAATTCTTAAGACAAGAATCTCTAACCATCCTCTCTATGAGCTTCTTGTTGAAGCTCACTTAGATTGTTTGAAGGTTAGTGACATTTCTAACATGGAGACAGAGAAAAAAGATAAGAAGAAAGCAATGAAGAAACAAAACTTGGATATGTTAAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTAATAAGCTAAAAGAAGCAATGGAGGAACCACAACAGAATTCCATGGAATTCATAAACAACATGCATTCACAACTTAGGGAGCTAACTCAAGCAACTACAACTCCAACCACTGAACCAGAAGCTACTACATCTTCAAGTGAATGCACATTCAGAAGAAACCCAACAATTTAA 492 0.3598 MESKMNSFVDDEKYKQDDQDLELEQEVGGGHEHDHQEENSEILKTRISNHPLYELLVEAHLDCLKVSDISNMETEKKDKKKAMKKQNLDMLSQSELDLFMEAYCLALNKLKEAMEEPQQNSMEFINNMHSQLRELTQATTTPTTEPEATTSSSECTFRRNPTI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02010 163 Coils Coil 69 89 - -
Trre11g02010 163 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 23 140 - -
Trre11g02010 163 SMART KNOX1_2 41 82 IPR005540 GO:0003677|GO:0005634
Trre11g02010 163 Pfam KNOX2 domain 93 136 IPR005541 GO:0003677|GO:0005634
Trre11g02010 163 Pfam KNOX1 domain 43 66 IPR005540 GO:0003677|GO:0005634
Trre11g02010 163 MobiDBLite consensus disorder prediction 137 163 - -
Trre11g02010 163 SMART KNOX2_2 86 137 IPR005541 GO:0003677|GO:0005634
Trre11g02010 163 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02010 Trre-Chr11 22403444 22406344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02010 41 150 Homeobox Transcription Factor Family AT4G08150 35.043 1.62e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02010 - - psat:127102620 230.335