Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02007 ATGGCTTTAGTCCACCGCCGCCGCAGCTCTAATCTCCGTCTCCCAGAAATCGCCGACCACCGTCCTCGTTTCCCTGTCCCTCTTCCTGCCAATACTTACAAACACCCTTTTTCCTCCTCATCCGCCACCGTTGCCGGCGGTGAAACTCTTTCCACCGGCGACTTTGAAAAGCTCTCCGTCCTCGGCCATGGTAACGGCGGCACCGTCTACAAAGTCCGCCACAAAGTCACCTCCACCATCTACGCTCTAAAGCCTAGAAACCGACCTCAAAACAAATGGCACTTCTCCGAATCAAAACTCTCCATGGTGGCGCGTGATGTTTTAAACGGTCTCGCGTATCTTCACGCGCGTAACATAGCGCATCGTGATATTAAACCTTCGAACATCCTCGTAAACAACAAAAACGAGGTGAAGATTGCTGATTTTGGTGTTAGTAAATTCATGGGTCGCACGCTTGAAGCATGTAACTCTTACGTTGGCACGTGTGCATATATGAGTCCTGAACGGTTTGACCCGGAAGTTTATGGCGGGAATTATAACGGTTTTTCAGCTGATATATGGAGTTTGGGTTTAACCCTATTTGAACTTTATGTGGGTCATTTTCCATTTCTTCAATCGGGTCAACGACCCGATTGGGCTACACTTATGTGTGCGATTTGCTTTTCCGACCCGCCAAGCCTCCCCGAGACTGCATCGCCGGAGTTTCGTAATTTTGTCGAGTGTTGTCTTAAAAAGGAATCTGGTGAACGGTGGACGGCGGCTCAATTGTTGACCCACCCGTTTTTGTGTAAAGATATGGAAGTTTGTTAA 810 0.4864 MALVHRRRSSNLRLPEIADHRPRFPVPLPANTYKHPFSSSSATVAGGETLSTGDFEKLSVLGHGNGGTVYKVRHKVTSTIYALKPRNRPQNKWHFSESKLSMVARDVLNGLAYLHARNIAHRDIKPSNILVNNKNEVKIADFGVSKFMGRTLEACNSYVGTCAYMSPERFDPEVYGGNYNGFSADIWSLGLTLFELYVGHFPFLQSGQRPDWATLMCAICFSDPPSLPETASPEFRNFVECCLKKESGERWTAAQLLTHPFLCKDMEVC 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02007 269 SMART serkin_6 55 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02007 269 SUPERFAMILY Protein kinase-like (PK-like) 50 264 IPR011009 -
Trre11g02007 269 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 48 85 - -
Trre11g02007 269 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02007 269 Gene3D Transferase(Phosphotransferase) domain 1 78 268 - -
Trre11g02007 269 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Trre11g02007 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Trre11g02007 269 Pfam Protein kinase domain 91 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g02007 269 FunFam Mitogen-activated protein kinase 2 86 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02007 Trre-Chr11 22330507 22331480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02007 1 262 MAP Kinase Kinase Gene Family AT1G18350 45.223 1.97e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Trre11g02007 Pkinase 8.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02007 K20604 - twl:119986423 348.591