Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01957 ATGTGTTTCAGTTTTCGCTGCTTCATGTGCCTCTATTGCACAATCTACACGGTTATATTCTTCTTTGTGGCTTTCACAACCGTCCTTTGGATAGTAATCTCTCCATCAAGTGTGAAATTCCACATAACCGATGCTACTCTCACCGAGTTCAACATTACGAATAACAATACCTTATATTACAATTTCAAAGTCAATGTCACCGCACGAAACCCAAACAATAACATCATAGTCAATTATCGACAAATCACTGCAATTGCTTGGTACAAAGATAACGATTTTGGTTATGTGAGTTTGACACCCTTTGATCAAGGACACAAAAATACAACATTTCTCGGGCCAATTGTATTCAATGGGAGCTGTGCAATCAAACTTGGACATCAACAACTTGACGAGTATTTTCAAGAGACGCGTCTTGGAAATTATAATGATTTGGCTGTTGATTTCGATATTCAAATTAAAGCTAAATTTGGACGTTTTAAAAGTGGCCGGTTTAGTCCACCAATTGTGCAATGTCGTCGTTTGAGAGTTCCTTTGGTTTCAGCTTCCAATAGTACTCACTCATTATCATCATTTTCGTTTAGCGAAAGAAGATGTAGCAGTGGTTCTTTCTTTACGGATCGTAATGCAAATGCCGGAGCTTGA 642 0.3816 MCFSFRCFMCLYCTIYTVIFFFVAFTTVLWIVISPSSVKFHITDATLTEFNITNNNTLYYNFKVNVTARNPNNNIIVNYRQITAIAWYKDNDFGYVSLTPFDQGHKNTTFLGPIVFNGSCAIKLGHQQLDEYFQETRLGNYNDLAVDFDIQIKAKFGRFKSGRFSPPIVQCRRLRVPLVSASNSTHSLSSFSFSERRCSSGSFFTDRNANAGA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01957 213 PANTHER OS05G0367900 PROTEIN 8 178 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01957 Trre-Chr11 19846758 19847399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01957 32 185 SNARE and Associated Proteins AT1G32270 28.387 4.15e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01957 - - gmx:100784278 257.299