Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01951 ATGCCTCACTCCTCCTCTCTCCCTTCTCCGCCTCTTTCCCTCCACCACAAGTTTAAAATAGGGTTTGAATCAGCTTCAAGCTCATGCGCTAATGACTCCGGTTCCAAAAGCTACAACTTAACACTTCAGATTTTATTTCGAATGGAAATTTTACAATCAGAGGTTGGACTCGGAATCGAAGATTCCAGTAAACAGAACAAAGATCATAAAAAGCAGATCGCTGCACAAATAGAAGCATTATACCAATATGGCAAATTTCAGTTTGAATGTGGAAACTACTCTGGTATAATTGATCTGTTTAACCAGGACAAGTATCTTAATGCAATCCAAACTAGTGCTCCACACCTTCTACGATACTTGGCCACAACATTTATTGTCAACAAGCGCCGAAGGCCTCAGTTCAAAGATTTTATAAAAGTTATTCAACTAGAGCAGAATTCATATAAGGATCCCATCACTGAGTTCATGGCTTGTGTCTATGTCAACTATGAGTTTGATGGCGCACAAAAGAAGATGAGGGAGTGTGAAGAAGTAATTCTCAATGATCCCTTCCTTGAGCAAGATCCCAACAGCTTGAAAAGAAAGAGGAAGAATACAAAGGGGAAAGGGAAAGCAAAGAATGAAAGCAAACAAGGAACTCAAGAAACTCAAGCACCAAAAGCACCAGCTGCTGATGCACCACAAGAAAGTCAGAACCAAGCACCACCAGCTGCAATTCCAACTCAAGCACCAGAATCAACTCAAGCTAGCCAAGTATCAATGGTTGTTGAACCAAGTCAAGACTTGTTTGCTGACATTTCTGATGATATAATTGCTTCACTACTAGATGTTGAGCCTGCTGAGCCTGCTGAACTTGTTGAACCTGCTGATCAGAAAAGAAAGAAAGTGAAAGATTTATACCATGATCCATGA 912 0.4057 MPHSSSLPSPPLSLHHKFKIGFESASSSCANDSGSKSYNLTLQILFRMEILQSEVGLGIEDSSKQNKDHKKQIAAQIEALYQYGKFQFECGNYSGIIDLFNQDKYLNAIQTSAPHLLRYLATTFIVNKRRRPQFKDFIKVIQLEQNSYKDPITEFMACVYVNYEFDGAQKKMRECEEVILNDPFLEQDPNSLKRKRKNTKGKGKAKNESKQGTQETQAPKAPAADAPQESQNQAPPAAIPTQAPESTQASQVSMVVEPSQDLFADISDDIIASLLDVEPAEPAELVEPADQKRKKVKDLYHDP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01951 303 MobiDBLite consensus disorder prediction 186 254 - -
Trre11g01951 303 MobiDBLite consensus disorder prediction 285 303 - -
Trre11g01951 303 MobiDBLite consensus disorder prediction 281 303 - -
Trre11g01951 303 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 70 95 IPR016650 GO:0003743|GO:0005737|GO:0005852
Trre11g01951 303 MobiDBLite consensus disorder prediction 226 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01951 Trre-Chr11 19654764 19662632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01951 94 185 Eukaryotic Initiation Factors Gene Family AT3G57290 84.783 5.49e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01951 K03250 - tcc:18600386 177.563