Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g01948 | ATGGATAATGCTGATCAAGTTGTCCAGCATGTTTTAGATTGTTACAGTTATTACCGTTATGTGATCGGCCTTGGTGATTATGCAGCTTTAGCCGCAGTTCGGAATGAACTTGGACACTTTACTGAACCGATGATAGCAAGATCCAGGACTCCTGGACCTATACCAGGAGTCCATGTAGGGGATCAATTCAGTTATCGATCTCAGATATTTCTGGTCGGAATGCATGACAATTTAGTTCGCGGTATTTCGTTAGGAAGCACTCTTTTTGGACTTGCAGATCGTGATGTAGCCACGTGCTGTGTGGCTGTCTTTGAGCTACATAATTTTTTTGCTCCAGACGATAGCGCGGTCACTTATGGTGGCGAGGGGGGGCATTTAAATTTGGCCAATCAAATGAATCTACGGGTATTAACCCATCAACAATGGACAAGGGGGAATAGAGCATTGTGGAGTTGTCACTTATGTGATTCGGAAGTACGTGTTATAGCACAAAGATTGGTGATGGAAGGCACTCGTGAATACGTATATATCGGACGATTTCAAGTGGTCGATATGGATGTTATCTTGTATAACAATTTGCAAGTCTATCAATATCAATTAACTCGGGTTGACATAAATGCTTTAGATTAA | 630 | 0.419 | MDNADQVVQHVLDCYSYYRYVIGLGDYAALAAVRNELGHFTEPMIARSRTPGPIPGVHVGDQFSYRSQIFLVGMHDNLVRGISLGSTLFGLADRDVATCCVAVFELHNFFAPDDSAVTYGGEGGHLNLANQMNLRVLTHQQWTRGNRALWSCHLCDSEVRVIAQRLVMEGTREYVYIGRFQVVDMDVILYNNLQVYQYQLTRVDINALD | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g01948 | 209 | Gene3D | - | 37 | 207 | IPR036987 | - | |
Trre11g01948 | 209 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR | 48 | 184 | - | - | |
Trre11g01948 | 209 | SUPERFAMILY | PUA domain-like | 45 | 204 | IPR015947 | - | |
Trre11g01948 | 209 | Pfam | SAD/SRA domain | 52 | 204 | IPR003105 | - | |
Trre11g01948 | 209 | ProSiteProfiles | YDG domain profile. | 52 | 202 | IPR003105 | - | |
Trre11g01948 | 209 | SMART | G9a_1 | 47 | 206 | IPR003105 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g01948 | Trre-Chr11 | 19578097 | 19578726 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre11g01948 | 49 | 182 | Su(var)3-9 homologs | AT5G04940 | 29.630 | 1.63e-08 | 52.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g01948 | - | K11420 | bvg:104886295 | 67.781 |