Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01918 ATGGACTCCGAGACATTCCAACGACGCCGTCGAACGAATTCCACTCACAACAAAAACAACGCCGTCGTAGGAGAGGAAAGGTTGAACCGCAGTGAGGTACTCGCAAAGAAGAAAGTCATTGAACAACTTATCAAAGCAGCAAATTCCAAAATTGATCAACTCGCCTATTTCCCCTCTTATCGCCACTTCAAAATTAACGGTCTGTCGGTGTGTTTGAATTCGGGACATGGCAATAAACTTTCCTCTCCTGTTAAACGTTATATTCAGAATCTCCTTAAGCTTAACATGGAAGGGCCATATGGATCTGAGTGGCAAGAGGAAGAAAAGGTGAAGCGTAGAGAAATGGTTGATCCCGAAGCGCGCTATATATTTGTGCATGAGTTTGCTAATTCAAATACTGATGACATGACGACTTTGTTGACTGAGGAAGATACTTCAACAAGTCGTCAAGAAGATAGTGGCCCCTTGGTTGGATTTGTACATTACCGCTTTGTTTTGGAAGAAGATGTACCGGTGCTTTATGTGTATGAACTACAGCTTGAGTCTCGTGTCCAGGGGAAAGGATTGGGAAAGTTTCTAATGGAACTTATCGAGCTTATCGCCCAAAAGAACTGCATGGGTGCTGTCATGCTAACTGTTCAAAAGGCAAACTTATTAGCGATGAATTTCTATATGAGTAAGCTAAGATATATGATATCAGCCACGTCACCTTCTAAGGTTAATCCAATGCTGGAGAAGAGTTATGAAATTCTTTGCAGAACATTTGATGACGAAGCTTAA 780 0.4179 MDSETFQRRRRTNSTHNKNNAVVGEERLNRSEVLAKKKVIEQLIKAANSKIDQLAYFPSYRHFKINGLSVCLNSGHGNKLSSPVKRYIQNLLKLNMEGPYGSEWQEEEKVKRREMVDPEARYIFVHEFANSNTDDMTTLLTEEDTSTSRQEDSGPLVGFVHYRFVLEEDVPVLYVYELQLESRVQGKGLGKFLMELIELIAQKNCMGAVMLTVQKANLLAMNFYMSKLRYMISATSPSKVNPMLEKSYEILCRTFDDEA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01918 259 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 25 259 IPR039949 GO:0010485|GO:0043998
Trre11g01918 259 Pfam Acetyltransferase (GNAT) family 124 225 IPR000182 GO:0016747
Trre11g01918 259 CDD NAT_SF 151 212 - -
Trre11g01918 259 Gene3D - 61 257 - -
Trre11g01918 259 MobiDBLite consensus disorder prediction 1 24 - -
Trre11g01918 259 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 123 226 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01918 Trre-Chr11 19181320 19184672 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre11g01918 Acetyltransf_1 9.3e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01918 K20794 - gmx:100500318 337.806