Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01896 ATGGAATATTGTTGGACATTGTTGGATAGGCTAGAAGGAGAAAAGATTAGTGAAAGGATGCTTCAGGATTTAGTCCCTGGTTGCAACTTGCATCAAGGTGTTTGGATCAGCTTGGTATTGAAGTATCAGATTTTGCAGATGGTAATGTTGGAACAAAGTGTTGATGTAATGTCTCTTATACTCTCCAATCCAATTCCATGA 201 0.3831 MEYCWTLLDRLEGEKISERMLQDLVPGCNLHQGVWISLVLKYQILQMVMLEQSVDVMSLILSNPIP 66
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01896 Trre-Chr11 18848264 18850964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01896 6 63 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.000 7.55e-07 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01896 - - egr:104449235 42.743