Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01843 ATGTCCATCATAGGATTGGGGCTCTTGCTTTTTGCGCTTCTCATTGGAAACACACATAACTTTCTTCAGGCTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTCAAAAAGAGAGTACGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTTTTCCTGAGAAAATGGTTCTCGAGAATTTGAAGAAGATCTCCAGACAGACATACAACGTCATCTCTTCAAATTTGTTAAAAAAGTTCGAATATTTTCCCTGA 309 0.4304 MSIIGLGLLLFALLIGNTHNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLKKRVRQAERYSWAATRGFPEKMVLENLKKISRQTYNVISSNLLKKFEYFP 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01843 102 SUPERFAMILY Voltage-gated potassium channels 3 63 - -
Trre11g01843 102 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 101 - -
Trre11g01843 102 Gene3D Helix hairpin bin 27 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01843 Trre-Chr11 18137574 18138651 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01843 17 81 Ion Channels AT3G17700 64.615 2.54e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01843 K05391 - gmx:100794895 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g01843 11 18137574 18138651 Trre11g01843 11 18137574 18138651 ECH