Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01839 ATGGAGTCATATGAGAAAGAAACTAGTCTAAAAAAAGAACATGTTGGTGCACTCTGTAGTGTAGTTGTGATAGGAAACAAAGTAGAGAATTTCAAGAAAGAAAAAGTTTATCCTTTTCATGTCACATGTGATGGAGAAAATGAACATTTAGGGAAGTCTGGAGCATTAGGAATGTGTGATGATCCTTATTGTACTACTTGTCCTACTTACTTCAAGGCTTATCAACAAAGTAATCCAAAAGATTCAACTGAATATGATTCCACGGTATCTGACACGTGTCACACTACACCGAAAATGATTCTCAATTTCGTGTGGGAAGTCGTTTTCGCAATTTCCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTTATTGGAAACATACAAAACTTTCTTCAAGGTCTTGGAAGAAGTGAAGCTCTGATGTTTTTAGTCCTTGGTGGTGTAACAATGAAAATGATATATTTTTCAATTTGCCGGAAATATAAAAGGAAATATAGTGAAGCTCTTGTAAATTTGCCGGAAGATCTTCAGATTGACATTAGGCGTCATCTTTTCAATTTTATCAAGAAAATTCGGGTTTTCTCTCTGATGGATGAGCCTATTTTAGATGCAATTTGTGAGAGACTAAGACAGAAGACATACATAAATGGAAGTAGAATTATGAGTCAAGGTGGTGTGGTTGAGAAGCATGTTGATATGTTCTGA 708 0.3559 MESYEKETSLKKEHVGALCSVVVIGNKVENFKKEKVYPFHVTCDGENEHLGKSGALGMCDDPYCTTCPTYFKAYQQSNPKDSTEYDSTVSDTCHTTPKMILNFVWEVVFAISIIGLGLLLFALLIGNIQNFLQGLGRSEALMFLVLGGVTMKMIYFSICRKYKRKYSEALVNLPEDLQIDIRRHLFNFIKKIRVFSLMDEPILDAICERLRQKTYINGSRIMSQGGVVEKHVDMF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01839 235 SUPERFAMILY cAMP-binding domain-like 171 229 IPR018490 -
Trre11g01839 235 Gene3D Jelly Rolls 163 232 IPR014710 -
Trre11g01839 235 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 102 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01839 Trre-Chr11 18075497 18076615 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01839 103 232 Ion Channels AT3G17700 51.370 7.50e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01839 K05391 - gmx:100794895 143.28