Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01835 ATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGGATTCCGGTTCCCTTATCCGAAGGGGATGCTTGTGGCGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAACAAAGCTAACTTGTCCGGCCACCATTTCAATCCCAGGAATGGATATGAATACCAGTTTACTCAGGAAATAGTCAAATATAAAAAAATTCAGGAACATGTCAAATTGAAATTATACATTTGA 246 0.3862 MVFIVRGKLESIGEDGIPVPLSEGDACGEELLRWYLEQSSENKANLSGHHFNPRNGYEYQFTQEIVKYKKIQEHVKLKLYI 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01835 81 Gene3D Jelly Rolls 1 78 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01835 Trre-Chr11 18056262 18061180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01835 1 46 Ion Channels AT3G17700 67.391 6.00e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01835 K05391 - mtr:11411638 78.5666