Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01834 ATGAATGATTTTGTCTATTTCTTAAACATTCTTCTCCAGTTTAGGTTAGCTTATGTTTCTCCAGAGTCAAGGGTGGTCGGCGCTGGAGATTTAGTTGTTGTACCAAAGAAAATTGCTGTCTATTATCTGAAGTGTTATTTTCTTATTGATTTGTTTGTTGTAATATTGCCTCTTCCTCAAGTTAAGATCTTCTCCTCTTCCTCTTTTCCTTATGGATTTTTTTTTTCCTTTTCTAGGCCGAATTAA 246 0.3415 MNDFVYFLNILLQFRLAYVSPESRVVGAGDLVVVPKKIAVYYLKCYFLIDLFVVILPLPQVKIFSSSSFPYGFFFSFSRPN 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01834 81 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01834 Trre-Chr11 18052158 18052562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01834 1 64 Ion Channels AT3G17690 57.812 2.98e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01834 K05391 - ccaj:109789004 99.3673