Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01830 ATGAATTATGTTGATGTTGACTCAAGTTTAATATGGAACTCGGATGAATATATTGATGTTAATTCCAATGAGGTTCATTCCACTGATGATGATACAGCTGGTGTTAAATTGAATGGTGATGAGGACGACAATTATTCTGTATCAAGTGGGTCTGAAAGTTCAAATGATAGCGATGATGCTGACAAAGGCAATGATGATAAACCGGTTGAAGTAGATGCAGTCGTAGGTTTTTCCGTTAGGAAAACTGATAGGAGAAAAGACCCAAAAGGCAGTAAAAAACTAGTGATGAGGGAGTTTGTATGCAACAAACATGGGTACAAAGATAAGAAACACTTGTGCAAGATAGATAGGAAAAGAGAGCATAGACGTTTGACCCGTACTGGTTGCACTGCTAGGCTTCGTGTGCAATACAAATCCAAAAAGGATAGATATGTAGTGTCAATTTTTGAAGAGGGTCATAACCATGAATTAACCCCTTCTAAGTATGTGCACTTACACCCCATTTATCGACAAATTTCTGAAGCAGATAGAGCTCAGATTGATGGTCTTCAGTCACACGGAGTTAGAACTTGCCATATAATGGGGTACATGGTTGCTCAGAAGAGTGGATATGCCGATGTGAACTCGTCTACTGATGCTATGCGATATGCTGAATATGCTGTCAACGAGATGATGGACGAATGA 684 0.3947 MNYVDVDSSLIWNSDEYIDVNSNEVHSTDDDTAGVKLNGDEDDNYSVSSGSESSNDSDDADKGNDDKPVEVDAVVGFSVRKTDRRKDPKGSKKLVMREFVCNKHGYKDKKHLCKIDRKREHRRLTRTGCTARLRVQYKSKKDRYVVSIFEEGHNHELTPSKYVHLHPIYRQISEADRAQIDGLQSHGVRTCHIMGYMVAQKSGYADVNSSTDAMRYAEYAVNEMMDE 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01830 227 ProSiteProfiles WRKY domain profile. 119 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre11g01830 227 MobiDBLite consensus disorder prediction 23 38 - -
Trre11g01830 227 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 75 204 - -
Trre11g01830 227 MobiDBLite consensus disorder prediction 23 90 - -
Trre11g01830 227 MobiDBLite consensus disorder prediction 55 69 - -
Trre11g01830 227 Pfam FAR1 DNA-binding domain 75 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01830 Trre-Chr11 17996739 17998613 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre11g01830 FAR1 3.3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01830 - - tpra:123910027 233.032