Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre11g01826 | ATGCTGCTGCTTGGTATGAAGCAGGATCAAGTTGACGGCACAAAGTCCACTTTCAATGGCGCATTTAGTAAGTGCAATTCTAAAGGTGGATCGCAATCTGAGAATGTGGCGAAGTCGCAGGATATACCTTCTGTTGCAAACAACCTTACTCCCAAGGTGAGGAAACCGTATACCATCACTAAACAAAGGGAGAAATGGACTGATGAAGAGCATCAGAAGTTTCTCGAGGCTTTGAAATTGTATGGTCGAGGGTGGCGTCAAATTGAAGAACATATAGGATCCAAAACGGCAGTTCAGATTCGAAGCCATGCTCAAAAGTTTTTCTCTAAGGTTGTGCGGGAACCTGATGGCATTGCTGAAAGCTCTATTCAGCCAATTGACATACCTCCTCCCCGGCCGAAAAGGAAACCCCTTCATCCATACCCTCGGAAATCCATCGACTCTTTCAAAGGACAGTCGGCTCCGAATGAATCAGAGACATCTCCATCCATTAACCTGTCAGTTGCAGAAAACGACACCCAATCTCCAACCTCCGTACTATCTGCACATGGTTCTGAAGCATTCGGCTCAGCAGCATTTTCTGAGCAGACTAATAGATGTCTTTCTCCAAATTCTTGCACCACCGAGATTCACCCGGTCAGCTTGTCACCTGTTGAAAAAGAAAATGATAGCCAGACATCCAAACCGTCCGAGGAGGAAGAGAAAGGGTCTCCTCCAGCTTTGGTTCCTCTATCAACCAACTCAAAACCACTTATGTGCTTGAAGTCCGAGATGATTTCTTCGGAGGAAACACAATGTTTCAAAGAAGATGCTGCAAATACGCCACACGTCACTTGTATTAAGCTGTTCGGTAGAACAGTCTCTATGGTAGGTACTGAGAAGTCAATAAATGATGATGACGAAAACATTAAGCCAGTAGCTATCAAATCTGATGAAATCGTTGAAAACGAAAAGATTGGCCAAGAAGAGGTATCAGAGCAGCTAGATACACAATTATCACTAAGCACATGTAGTGGTAATTTGCATGTAACACCTGATGGAGTTCAAGTAAGAAGCACTGAACAACCGAAGGAGAATCTATACATCAGCGATTGTGCAGCAGCATCTTTACCATTGTGGAGTTTGTACCAAGGCCTTCCATCATTCAACCTCAAACCATGCAATCATGAGATTATTAATCCTGTACCTCTTAGACCCTCTTTGAAGATAAGAACAAGAGAGGAAGAAAGTTCTTGCACTGGTTCAAATACTGAATCAGTTTTTGATATGGAAAATCAAAGCAAGAATAACTCATCATCGGATACCGATGATTCTCAAAGTCAAAAACATCATCAAGAAAGTGTAGTAATTAAGAAATCTGGAAGAGGGTTTGTACCATATAAAAGATGTTTAGCTGAAAGAGATGAAAATTCTTTAATTGTTGGATTGGAAGAAAGAGAAGGACAAAGAGCTCGTGTGTGTTCATAG | 1467 | 0.4206 | MLLLGMKQDQVDGTKSTFNGAFSKCNSKGGSQSENVAKSQDIPSVANNLTPKVRKPYTITKQREKWTDEEHQKFLEALKLYGRGWRQIEEHIGSKTAVQIRSHAQKFFSKVVREPDGIAESSIQPIDIPPPRPKRKPLHPYPRKSIDSFKGQSAPNESETSPSINLSVAENDTQSPTSVLSAHGSEAFGSAAFSEQTNRCLSPNSCTTEIHPVSLSPVEKENDSQTSKPSEEEEKGSPPALVPLSTNSKPLMCLKSEMISSEETQCFKEDAANTPHVTCIKLFGRTVSMVGTEKSINDDDENIKPVAIKSDEIVENEKIGQEEVSEQLDTQLSLSTCSGNLHVTPDGVQVRSTEQPKENLYISDCAAASLPLWSLYQGLPSFNLKPCNHEIINPVPLRPSLKIRTREEESSCTGSNTESVFDMENQSKNNSSSDTDDSQSQKHHQESVVIKKSGRGFVPYKRCLAERDENSLIVGLEEREGQRARVCS | 488 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre11g01826 | 488 | SMART | sant | 62 | 110 | IPR001005 | - | |
Trre11g01826 | 488 | CDD | SANT | 65 | 108 | IPR001005 | - | |
Trre11g01826 | 488 | MobiDBLite | consensus disorder prediction | 412 | 436 | - | - | |
Trre11g01826 | 488 | FunFam | protein REVEILLE 6 isoform X1 | 65 | 113 | - | - | |
Trre11g01826 | 488 | MobiDBLite | consensus disorder prediction | 119 | 163 | - | - | |
Trre11g01826 | 488 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 61 | 110 | IPR006447 | GO:0003677 | |
Trre11g01826 | 488 | ProSiteProfiles | SANT domain profile. | 61 | 112 | IPR017884 | - | |
Trre11g01826 | 488 | MobiDBLite | consensus disorder prediction | 149 | 163 | - | - | |
Trre11g01826 | 488 | Gene3D | - | 65 | 112 | - | - | |
Trre11g01826 | 488 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 58 | 112 | IPR017930 | - | |
Trre11g01826 | 488 | MobiDBLite | consensus disorder prediction | 26 | 49 | - | - | |
Trre11g01826 | 488 | MobiDBLite | consensus disorder prediction | 210 | 247 | - | - | |
Trre11g01826 | 488 | ProSiteProfiles | Myb-like domain profile. | 58 | 108 | IPR001005 | - | |
Trre11g01826 | 488 | Pfam | Myb-like DNA-binding domain | 63 | 106 | IPR001005 | - | |
Trre11g01826 | 488 | PANTHER | SWI/SNF COMPLEX-RELATED | 37 | 417 | - | - | |
Trre11g01826 | 488 | MobiDBLite | consensus disorder prediction | 405 | 448 | - | - | |
Trre11g01826 | 488 | SUPERFAMILY | Homeodomain-like | 57 | 111 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre11g01826 | Trre-Chr11 | 17908092 | 17910833 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Trre11g01826 | Myb_DNA-binding | 9.9e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre11g01826 | - | - | gmx:778089 | 607.446 |