Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01770 ATGACAAAGCTCGCACGGATATCTGATTACTTCTGGTCTGAAGAGATAGTCCACATTGCTAAAGGAGAAGGAATTACAAATTCAATTTCTATCCTTCGTGCTGATAATGTTGTGAATGGAAACAAGGGAAACATGCTATATTTACAAGATTCATGGACAGATAGTTATGGTTCAATGGTCGTGTATTCTCCGATCAGTTTGGAATCCTTGAGCATACTGATGAACAGGGGAGATTCTTCATCTGTTCATTTTTTGTCTTCCGGCTTTTTAATTCTTTTAGATGGCCATTCAAGTAACAATACCATCGTTGGAAATTTAACCGACGGTAGTTGGAGTAGTGGCAGCAGTCAGCAGTGGCAACTCTGGATGTTGCTGGCGGGGTGGCATTTAGTATGGGACAATGAAGTATTTTTCCACCATGGAAAAGTTTGA 432 0.4028 MTKLARISDYFWSEEIVHIAKGEGITNSISILRADNVVNGNKGNMLYLQDSWTDSYGSMVVYSPISLESLSILMNRGDSSSVHFLSSGFLILLDGHSSNNTIVGNLTDGSWSSGSSQQWQLWMLLAGWHLVWDNEVFFHHGKV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01770 143 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 100 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01770 Trre-Chr11 17202525 17203327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01770 14 97 Homeobox Transcription Factor Family AT3G61150 44.048 5.55e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01770 K09338 - gmx:100785102 94.7449