Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01755 ATGGATCCTGGAAAACGGAGCAGGTTATGGTATTATGAAGATGTGCTTCAAGTACTGTCCGATGGAACAGGAACTGACAAGATTCAAGGTATAATGCTGAGCCTACCTGAAAAGCAAGAGGTTCAGATAAAACCTCAAGACCTAAAGAAGATGAGAAACCTTAGAATGTTGATAATTCGGAATGCTGAATTTTTCGGAGACCAAGTAAATCTACCAAATAATTTAAGGCTGCTTGATTGGGAAGAATACCCTTCTACATTTTTACCATCTGATTTTCTTCCCGAGAAAATTGTAATGCTAGAGTTGCGGCACAGTCATATAACATTGGACAAGCCATTCAAGAACTATGCAAATATGACTTCACTGAATCTTAGTTCTTGTCAATCCCTGATAAAAATACCTGATGTTTCGGGGATACCGAATTTAGAGCAAATTATTCTAGAGGATTGTACAGGCTTACTTGAGGTTCACGAATCACTTGGATCGCTTGATAAACTAGTTTATTTAGGTGTTGAAAGGTGCACTGAGCTAAAGAAGTTACCAAGTGTCCTAAACTCGCCATCTTTATCATGCATTGCTCTCAATGGATGTTCTCAACTTGAGAATTTCCCACACTTACTTGGAAAAATGGAAAATCTGAGAATCATCGAGGCAGAAGAGACGGCTATACAAGAATTGCCTTCTAGTTTGGCCAACTTCAGCAACCTTGAGGTGTTAGTACTAAAATGTTGCACAAATCTTAAGGACTTTCCTAGAACTATTTCTTTGTTGCCAAATCTTCAATTACTTGATATTTCTGGTTGTCCAAAACTTCAACTATTTCAAGGATCCACTCAAAGTTCATCAAATTTAGAGTTACCACCAAAACCATGTCTAGATTTTGAATCTTCAAGCATCCAATCCTCACATGGTTTCCCTTTATTGGAAACACTTGATCTTAGTGACTGTAATCTATCAGATGATGATCTACATATCCTTTGTTGCTTTTCAAACCTCACATCATTAGACATATCAAGAAACCATTTTGTAACCCTACCTAAATGCTTCAACAAACTGAGTAGCTTGCAGGAGCTTTACATGGCCAATTGCAAGAATCTTCAAAACTTTTCTGGGATTCCTCCTAATTTAGAACATATTGATGCTACTAGTTGCACAATGTTGGATTCACAATCATTGGACCTATTATTAAGCCAGGGATTCCATAAGGAATTCAAATTTGAAGTTATAGCACCAAGGTCAAGATTACCAATGCCATTCGAGTTCAACTACCATAGCAAAGGAGGATCCATGACATTCTGGATTGGCCAGAAGTTTCCAAGAATTGCACTATGCTTCATTTTTGAACTAGGAAATAAAAGAGTTGGTTTTTTTTGCATGTGA 1380 0.3732 MDPGKRSRLWYYEDVLQVLSDGTGTDKIQGIMLSLPEKQEVQIKPQDLKKMRNLRMLIIRNAEFFGDQVNLPNNLRLLDWEEYPSTFLPSDFLPEKIVMLELRHSHITLDKPFKNYANMTSLNLSSCQSLIKIPDVSGIPNLEQIILEDCTGLLEVHESLGSLDKLVYLGVERCTELKKLPSVLNSPSLSCIALNGCSQLENFPHLLGKMENLRIIEAEETAIQELPSSLANFSNLEVLVLKCCTNLKDFPRTISLLPNLQLLDISGCPKLQLFQGSTQSSSNLELPPKPCLDFESSSIQSSHGFPLLETLDLSDCNLSDDDLHILCCFSNLTSLDISRNHFVTLPKCFNKLSSLQELYMANCKNLQNFSGIPPNLEHIDATSCTMLDSQSLDLLLSQGFHKEFKFEVIAPRSRLPMPFEFNYHSKGGSMTFWIGQKFPRIALCFIFELGNKRVGFFCM 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01755 459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 210 384 IPR044974 GO:0006952
Trre11g01755 459 Pfam Leucine rich repeat 307 363 IPR001611 GO:0005515
Trre11g01755 459 Gene3D Ribonuclease Inhibitor 32 189 IPR032675 -
Trre11g01755 459 Gene3D Ribonuclease Inhibitor 190 398 IPR032675 -
Trre11g01755 459 SUPERFAMILY L domain-like 32 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01755 Trre-Chr11 17122826 17124894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01755 3 279 WRKY Transcription Factor Family AT4G12020 36.395 1.54e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01755 - - tpra:123904012 847.04