Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01746 ATGGCAACTAATCAACCATCCTCATCCTCTTCTTTCACCTACGACGTGTTCATAAGCTTTCAACCTGATGATAGTTGTAATGGTTTTGCCGGCAGTCTATGGAAAGCTTTAAATGACAAAGGAATCTGCACCTTCATCGATGACCAGTTGCTTCCCAAAGGACCAGCACTTCTCAAGGTCTTCTCCAAATCCAGGGTTGCCATTATCGTGTTCTCGGAGAACTATGCTTCGTCTTCATATTGCTTGGACGAACTTGCCTTTATCCTTGATAACTTTCAGCAGAATCACAACAATCGATTTATTTTTCCGGTTTTTTACAACATCGATCCTTCTGATGTGCGACGCCAAAGTGGAACTTATGGTGAAGCATTTTCAATGCATGAGGCCATGTTCGGGGGAAACAATGGAAGAGTGGTTAAATGGAGGACCGCTCTAACTCAGGTAGCTAGCTTGTCCGGGTGGCATTACAGTCATAGTGATGGGTATGAATTTGAGTTTGTCGAAAAGATTGTGGAAGGTGTCTCCAGGAAAGGAATCTGCACCTTCATCGATGACCAGTTGCTCTCCAAAGGGGACTATCTCGCACCAGCACTTCTCAAGGTAGCTAGCTTGTCCGGGTGGCATTACAGTCATAGTGATGGGTATGAATTTGAGTTTGTCGAAAAGATTGTGGAAGGTGTCTCCAGGAAGTTCGATCATATTCCTTTACACAATGGCAGTTACACCGTTGGATTGAATTCTCGATTGGGAGAAGTGTACCCGCTTTTGGAGATGGAATCTCATGAAGTCTTTCTGGTGGGGATTTATGGGATTGGCGGGATAGGGAAAACCACACTTGCTCAAGCAATTTATAATATGATTGCAGACCGATTTGAAGCCTCATGTTTTCTGTCCAACGTTAGAGAAAGTTCAAATAGATATGGATTAGTGCACCTACAAAATATGCTTCTTTCTGAATTGACTGGGTGGAAAGATATTCAGTTAAGAAGCGCTAGTCAAGGAGTTTCGATAATAAAGCATAGGCTCCACCGAAAGAAAGTTTTACTCATCCTAGATGATGTGGACAAACTAGAACAATTGGAGGCTTTGGTTGGAGGACTTGATTGGTTTGGTTCTGGTAGTAGAGTTATCATTACAACACGGAATAAGAGTTTGCTAACATATCATGGGGTTGAGAGAAGATACGAGCTACAAGAGTTAAATCGCGTAGATTCTCTTGAATTGCTTATCCACAAGGTTTTTAAACAAGGCATTGTTGACCCAAATTACAAAGAACTTTTAGACCGAGCAGTAACTTATGCTTCCGGGCTTCCATTGGCCTTGGATGTAATAGGTTCATGCTTGTCTGGAAAAACAGTTGACCAATGGAAAAATGCATTCGATCGATATGAGCGGGTTCCTCCTAACGAAATTCAGAGTATGCTTAGACTAAGCTTTGATGCATTGTATCAAAAGGAAAGGAACCTTTTTCTGGATATTACTTGTTGCTTCAAAGGATATAAATTGGCAGATGTCGAGGATATACTCCGTGCTTGTTATGGCCACGACATGAAACATCATATTGAAGTGTTGATTAACAAGTCTCTCATAAATATCAGTTTGGATGGTGAGGTGACATCACATCCCTTGATTGAAGACATGGGTAAAGAAATTGTTCGTCAGGAATCACCACAAGATCCAGGGAGGCGTAGTAGATTATGGTTCCCTGAAGATATAGTTCAAGTTTTAAAAACTAATAAGGGAACGAGTAATATAGAAATCATACATCTAGATTCCCCCTTAATTGAAGATGAAGAAGCAATAGAATGGGATGGAAAGGCCTTTGAGAAGATGCCAAACCTCAGAATACTTATTATTAGAAAATGTCGTTTCTCTAATGCTCCCAAGTATCTTCCAAACAGTTTAAAAGTATTGGAATGGTTGAGATATCCTTCAGAGGAGTTACCATCTGATTTTGATTCAAAGCAACTTGTCATATGCAAGATTTTGCATGGGGTCTCTGATGTTTCTCAGACTTCACAGAGTACTCCTGATTCTTCTCAGACTACAGAGAGTACTCCTGATGTTTCTCAAGGTATACTGCAGATTTCACATACAGTGTTTCAAGCTGAGACGGCGTGGAGACTAGTTGGCCTTATGTCAATTGTAGTTGGCCTGTTATGTTATGCTCTGAGCCCTTCTTTCAATCGATTATATGGAAGGTGGAAACCTTTCAAGTTCTTTCTCTATGGGTCGTTGTCCTTGGCTATATTTTCGACCATATTGTTTGCAAGGAAAACATCAATTTCTACACAGCATGTTAAACTCAAAACATTCACGAGTTTTGCAGTTTTGCTTATAATCTCGGTGTACTCATTCTTCTACGACAAAGCTGTGAATGGAAAACCTGAAATACTGAGTGTAGTTTCAAATGCCGCTTTTGCTTTGGTGTCATTAAGCCTGCACAAACTGATTAATTTTGGGTTTGAGTTTGGTGTGTTCACTTATTTCTTAGGCTGTTTTACAGTTCAATTGTTTACCATCAACTGGATGCTGATTTTGATTGCGATATTCTTTGGTTGTCCGCTCTTTTTTATGCATTCCTCTTTGAATTCCCGACTGGAGCCGAAGGTAGCTAGTGTAAGTCAAGTTATTCATTCATCTTCAAACTTCATACTAGCTATTGATAGTGGTGGTCAACATATTGTTAGCATTGATCCGTGA 2703 0.4033 MATNQPSSSSSFTYDVFISFQPDDSCNGFAGSLWKALNDKGICTFIDDQLLPKGPALLKVFSKSRVAIIVFSENYASSSYCLDELAFILDNFQQNHNNRFIFPVFYNIDPSDVRRQSGTYGEAFSMHEAMFGGNNGRVVKWRTALTQVASLSGWHYSHSDGYEFEFVEKIVEGVSRKGICTFIDDQLLSKGDYLAPALLKVASLSGWHYSHSDGYEFEFVEKIVEGVSRKFDHIPLHNGSYTVGLNSRLGEVYPLLEMESHEVFLVGIYGIGGIGKTTLAQAIYNMIADRFEASCFLSNVRESSNRYGLVHLQNMLLSELTGWKDIQLRSASQGVSIIKHRLHRKKVLLILDDVDKLEQLEALVGGLDWFGSGSRVIITTRNKSLLTYHGVERRYELQELNRVDSLELLIHKVFKQGIVDPNYKELLDRAVTYASGLPLALDVIGSCLSGKTVDQWKNAFDRYERVPPNEIQSMLRLSFDALYQKERNLFLDITCCFKGYKLADVEDILRACYGHDMKHHIEVLINKSLINISLDGEVTSHPLIEDMGKEIVRQESPQDPGRRSRLWFPEDIVQVLKTNKGTSNIEIIHLDSPLIEDEEAIEWDGKAFEKMPNLRILIIRKCRFSNAPKYLPNSLKVLEWLRYPSEELPSDFDSKQLVICKILHGVSDVSQTSQSTPDSSQTTESTPDVSQGILQISHTVFQAETAWRLVGLMSIVVGLLCYALSPSFNRLYGRWKPFKFFLYGSLSLAIFSTILFARKTSISTQHVKLKTFTSFAVLLIISVYSFFYDKAVNGKPEILSVVSNAAFALVSLSLHKLINFGFEFGVFTYFLGCFTVQLFTINWMLILIAIFFGCPLFFMHSSLNSRLEPKVASVSQVIHSSSNFILAIDSGGQHIVSIDP 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01746 900 PRINTS Disease resistance protein signature 609 625 - -
Trre11g01746 900 PRINTS Disease resistance protein signature 434 448 - -
Trre11g01746 900 PRINTS Disease resistance protein signature 341 355 - -
Trre11g01746 900 PRINTS Disease resistance protein signature 265 280 - -
Trre11g01746 900 SMART till_3 13 151 IPR000157 GO:0007165
Trre11g01746 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 493 IPR027417 -
Trre11g01746 900 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 197 665 IPR044974 GO:0006952
Trre11g01746 900 Gene3D - 230 392 IPR027417 -
Trre11g01746 900 Gene3D - 7 182 IPR035897 -
Trre11g01746 900 Pfam TIR domain 14 171 IPR000157 GO:0007165
Trre11g01746 900 Gene3D - 399 483 IPR042197 -
Trre11g01746 900 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Trre11g01746 900 SUPERFAMILY "Winged helix" DNA-binding domain 469 577 IPR036390 -
Trre11g01746 900 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Trre11g01746 900 Pfam NB-ARC domain 255 466 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01746 Trre-Chr11 17064442 17070106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01746 243 658 WRKY Transcription Factor Family AT5G45050 32.579 6.52e-57 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01746 - - psat:127132204 1075.85