Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01741 ATGACACTATTTCAGGCTAGATCCAACACCACTTCACAAATATTTGTCCACATGCTGAGGAAAGGGGTTTCAGAGGCGAGGATACTCGTCATGGTGGATCCTTCTGATATACGAAAGTTACAAAAGAGTTTTGGAGAAGCAATTGCTAAACATATGGGCAACTCCAATCCTAACATAAATAAATGGAAGATGTCTCTTCAGCAAGTTGCTAGTTTGTCCGGATTTCATTACAAGAAAGGAGAGATGTATGAGCATGAGTTTATTGGGAAGATTGTTGAAGAAGTCTTAAAAAAGATAACAGTTGAGGATATGGGAAAAGATATTGTTAAACAAGAATCACCAAATCCATGGGAACGCAGTAGGTTATGGGACTCTAAAGATATAAATGAAGTTTTAAAAGAAAATAAGGAAACAAGTAAAATTGGAATCATATATGTGAACGAAAGTATTAAAGTTGAACAGGATGGAGAAGCTTTCAACAAGATGAAAAATCTCAAAACACTACTTATTGATAAACTGGCATATGTTTCTGGAAGTCTCAAACATCTTCCAAATAGTCTAAGAGTACTGGATTGTCGTTCATATTGCAAAACAAAAGTTGTCTTTCCCAATAAGAAATTCCAAAATATGCGAGTTTTAAATTTTGATCATCCCATGGTAGAGTTATTACAAATAATACATGCCCTATCTAAATGCCCAAATTTAGAAGAACTTTCAATTCAAAAGTGTTGGGGCAAATTTACAAGTGATGAATCAGTTGGTTTTTGGAGTAATCTTAAAATCTTGAGAATTATAAGATGCAGACAGATCAAAAGTGTTCCACCACTCAATTGCCCTTCCCTAGTAGAACTCGACCTTTCAAATTGTTCTAGTCTAGAAAGTTTTCCTTCCACGGTGAATGGATTTGCTGGAAATCTGAAAATCTTGAGGCTTGAAGGCAAAAGCAAATTACTGAATGAGAAATTACATGAGGCTGAAAACACCTGGTTCAGCTTGCCACACGCAAAGATTCCAGAGTGGTTTGATCACCAATGCTCGGCAGGATCGTCCATTTGTTTCTGGTTTCGTAACAAGTTTCCTGCCATAGTTTTGGGTGTTGTTTCTACACTATCATGGTCCGACTATCATCATTATCCCGTAACAGTGATCATCAATGGCAATAAATTTTTCTATCCTCCGCCTGAGCCTGAGGAGGTTGATGTGCAAGACAAGAAGCAGGAAAATGTTGGGATGCATGAGGCTCAGTCTGAGCCGGAAGAGGATGCTCAAGAGTAG 1275 0.3765 MTLFQARSNTTSQIFVHMLRKGVSEARILVMVDPSDIRKLQKSFGEAIAKHMGNSNPNINKWKMSLQQVASLSGFHYKKGEMYEHEFIGKIVEEVLKKITVEDMGKDIVKQESPNPWERSRLWDSKDINEVLKENKETSKIGIIYVNESIKVEQDGEAFNKMKNLKTLLIDKLAYVSGSLKHLPNSLRVLDCRSYCKTKVVFPNKKFQNMRVLNFDHPMVELLQIIHALSKCPNLEELSIQKCWGKFTSDESVGFWSNLKILRIIRCRQIKSVPPLNCPSLVELDLSNCSSLESFPSTVNGFAGNLKILRLEGKSKLLNEKLHEAENTWFSLPHAKIPEWFDHQCSAGSSICFWFRNKFPAIVLGVVSTLSWSDYHHYPVTVIINGNKFFYPPPEPEEVDVQDKKQENVGMHEAQSEPEEDAQE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01741 424 Coils Coil 308 328 - -
Trre11g01741 424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 101 314 IPR044974 GO:0006952
Trre11g01741 424 Gene3D - 9 107 IPR035897 -
Trre11g01741 424 MobiDBLite consensus disorder prediction 397 424 - -
Trre11g01741 424 Gene3D Ribonuclease Inhibitor 135 333 IPR032675 -
Trre11g01741 424 MobiDBLite consensus disorder prediction 394 424 - -
Trre11g01741 424 SUPERFAMILY RNI-like 154 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01741 Trre-Chr11 16967212 16974606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01741 101 296 WRKY Transcription Factor Family AT4G12020 24.895 1.13e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01741 - - mtr:25488454 219.164