Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01681 ATGAGCTTGATCATTGACATAACAATTTTATATATTATTTTGTTCTTTGTTTCATTGAACATAGTTTTGTGTATTGAAATTGAAATCAATGATTTTGATCCACAAGAAAGAGATGCTTTGTTAGTCCTAAGAGATTCTTTAAATTCTTCTTCTATAAATTTGCATGGAAATTGGACAGGACCACCTTGTATAAACAACCTTAGTAGATGGTTTGGAATCACTTGTTCAAATTGGCATGTTGTTCATATTACAATTCAAGGTGTTAATCTTAGTGGCTATTTACCTTCAACATTTCAAAATATAACTTTCTTGAGACAAATTGATTTTAGAAATAATGCACTTTTTGGAACATTGCCTAATCTAACAGGTTTGGTTTTCTTGGAAGAAGTGAAGCTTTCAGTTAATCACTTTTCAGGTTCAATTCCTTTGGAATATGTTGAATTGTTAAGTCTTAAAGTTTTGGAATTACAAGAGAATTATTTAGATGGTGAAATTCCACCTTTTGATCAACCTTCATTGATAAGTTTCAATGTGTCATATAATCATTTGGTTGGGAAAATTCCTCAAACTTCTTTGCTTCAAAGGTTTCTAAAAAGTTCTTTTGATGATAATTCTGATCTTTGTGGATTTCCATTGGATAAGTCATGTTCTGCTGAACCTCCTGCAGCATCTCCTTTTGCTATTCCACCTAGTCCTTCAATGGAAGAAAATAAGAAGAGACTTCAAGTTTGGATTATTGCTTTGATTGCTATTGTTGCAGCTGTTTTGTTTCTTTTTCTGGTGATTATTGCTTTCTTGTTTTGCAAAAGAAAAGCTAAAGGAAATGAAACAAGAAGAAATGATTCAGCAAGGTATGTTTTTGGAGCATGGGCAAAGAAGATGGTATATAATGCAGGAAACAGTGAAGATTCTGAAAAATTAGGCCAATTAGAATTTTGCAACAAGAAATTTCAAGTTTTTGATATGGATGATTTATTAAGAGCATCAGCAGAAGTTCTAGGAAGAGGAGATTTTGGTGTTACATATAAAGCAACACTTGAAACAGGTAATACTCTTGCAGTAAAGAGACTTAGCTACATGAATGAATTGAACAAGAGGGAATTTATTCAACAAATGCAATTATTAGGAGAAATTAAGCATGAAAATGTTGTTGAAATTATCTCCTTTTATCATTCAGAAGATCAAAAGCTTGTCATATATGAACTTGTTTCTGATGGCACTTTGTTTGAACTCCTCCATGAGGGTAGAGGAATTGGAAGAATACCTCTTGATTGGAGTACAAGACTTGCAATTATCAAAGACATAGCAAAAGGTCTTAATTTCCTTCATCAATATTTGTCATCTCACAAAGTTCCTCATGCAAACCTCAAATCATCAAATGTTCTAATCCATCAAGACAATCAAGGTTACCATTCAAAGCTCATAGATTATGGTTTCTTACCTTTACTCTCATCATCCAAGAAAAATGAAGAAAAGTTAGCAATAAGTAAGTCACCAGAATTTGTTAAAGGGAAAAAGTTGACACACAAAAGTGATGTATATTGTTTTGGTATCATTATGCTAGAGATTATAACAGGTAAAATTCCAGGTCATATCTTAGGTAGTGAAGTTGAAGAAATAAGAACTAATGATCTTTCAGATTGGGTTAGAACTGTTGTGAATAATGATTGGTCTACTGATATATTGGATTTGGAAATCTTAGCAGAAAGAGAAGGACATGATGCAATGTTGAATTTAACTGAGATAGCTCTTGAGTGTACTGATATGATACCTGAGAATAGGCCTAAAATGAGTGTGGTGTTGGGGAAAATTGAAGAGATAGAGCAAATGATAAAAGAGAATGAATGA 1848 0.3236 MSLIIDITILYIILFFVSLNIVLCIEIEINDFDPQERDALLVLRDSLNSSSINLHGNWTGPPCINNLSRWFGITCSNWHVVHITIQGVNLSGYLPSTFQNITFLRQIDFRNNALFGTLPNLTGLVFLEEVKLSVNHFSGSIPLEYVELLSLKVLELQENYLDGEIPPFDQPSLISFNVSYNHLVGKIPQTSLLQRFLKSSFDDNSDLCGFPLDKSCSAEPPAASPFAIPPSPSMEENKKRLQVWIIALIAIVAAVLFLFLVIIAFLFCKRKAKGNETRRNDSARYVFGAWAKKMVYNAGNSEDSEKLGQLEFCNKKFQVFDMDDLLRASAEVLGRGDFGVTYKATLETGNTLAVKRLSYMNELNKREFIQQMQLLGEIKHENVVEIISFYHSEDQKLVIYELVSDGTLFELLHEGRGIGRIPLDWSTRLAIIKDIAKGLNFLHQYLSSHKVPHANLKSSNVLIHQDNQGYHSKLIDYGFLPLLSSSKKNEEKLAISKSPEFVKGKKLTHKSDVYCFGIIMLEIITGKIPGHILGSEVEEIRTNDLSDWVRTVVNNDWSTDILDLEILAEREGHDAMLNLTEIALECTDMIPENRPKMSVVLGKIEEIEQMIKENE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01681 615 Gene3D Phosphorylase Kinase; domain 1 293 402 - -
Trre11g01681 615 Gene3D Transferase(Phosphotransferase) domain 1 403 615 - -
Trre11g01681 615 ProSiteProfiles Protein kinase domain profile. 327 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g01681 615 FunFam Leucine-rich repeat receptor-like protein kinase 126 218 - -
Trre11g01681 615 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Trre11g01681 615 SUPERFAMILY L domain-like 33 197 - -
Trre11g01681 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 609 IPR046959 -
Trre11g01681 615 Gene3D Ribonuclease Inhibitor 33 218 IPR032675 -
Trre11g01681 615 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Trre11g01681 615 Pfam Protein kinase domain 330 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g01681 615 SUPERFAMILY Protein kinase-like (PK-like) 331 602 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01681 Trre-Chr11 16494372 16497572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01681 36 608 Receptor kinase-like Gene Family AT1G48480 34.658 4.21e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre11g01681 Pkinase 1.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01681 - - gmx:102668068 868.996