Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01679 ATGAGAGAAAATATATCAGAAACATGGTTAGTTATGATCATTGTGATATTGGTCACTGCAATATTTGCAAAATTAATTCAAATCAAACTAAGAAAAGAAGAGAAAAAAAGCATTTGTAGATTACCACCAGGAAGGAGAGGTTGGCCTTTGATAGGTGATAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCACCCTCCTCAATTTGTTGAAGAAATGGTGCAAAGATATGGTAAGATATTTTCTTGCAGCCTATTTGGAAAATGGGCAGTGGTGTCATCAGATCCGAGTTTCAACCGTTTTGTAATGCAAAATGAAGGAAAATTGTTCATGTCAAGTTATCCAAAATCTTTTAGAGATTTGGTTGGTAAAAACGGTGTAATCACAGTTCAAGGCGAGCAACAAAGAAAACTACATGGAATTGCGTCCAATATGATGCGCTTAGATAAGCTTAAGTTCCATTTCATGAACGATATACAAAATGTCATGATTCAAACTTTGAGTAATTTTAAGAACAACCAAGTCATTCTTCTCCAAGATGTTTGTAGAAAGGTAGCTATAAATTTAATGGTTAATCAATTATTAGGGGTTTCAAGTGAGTCTCAAGTAAATGAAATGGCTCAGTTGTTTTCTGATTTTGTTGATGGTTGTTTATCCATTCCAATCAATATCCCCGGCTCTTCATACCACACTGCTATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAATATCATAGAGGTACACAGAAAAAATGGTGCTCCCACAGAAGGTAATAATGGTGTACTTGGAAGACTAATAGAGGAAGATTGTTTGCCAGATGAAGCTGTTGCAGATTTCATCATTAATCTTCTTTTTGCTGGCAATGAAACAACCACAAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGCCCTAAAGCCATGAAGCAACTTCTGGATGAACATGATTCTCTAAGGACTAATTCTGGAGAAGAATTTCTTACATGGCAGGACTATAAAGCAATGCCATTTACTCAATGTGTTATTGATGAAACACTTAGATTTGGTGGCATTGCAATTTGGTTAATGAGAGAAGCAAAACAAGACATTCAATACCAAGATTTTGTTATTCCAAAAGGATGCTTTGTGGTTCCATTTCTTTCAGCAGTTCATTTAGATGAAAAAATATTCAATGGAGCTAAAAACTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGAAAAGAGAAATTGGAGAACAAGTCCATTTTATGGACCCTTTGGAGGAGGTGCTAGATTTTGTCCAGGAGCTGAATTGGCTCGTCTTCAAATTGCTCTTTTTCTTCATTACTTTGTAACAAATTACAGATGGACACAAATGAAGGAAGATAGGATGTCCTTCTTTCCCTCAGCTCGATTAGTGAATGGCTTCGAAATTTGTCTAACAAGAAGACATGATTTATAA 1455 0.356 MRENISETWLVMIIVILVTAIFAKLIQIKLRKEEKKSICRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVQRYGKIFSCSLFGKWAVVSSDPSFNRFVMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIQTLSNFKNNQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGSSYHTAMKAREKIISKINNIIEVHRKNGAPTEGNNGVLGRLIEEDCLPDEAVADFIINLLFAGNETTTKTMLFAVYFLTQCPKAMKQLLDEHDSLRTNSGEEFLTWQDYKAMPFTQCVIDETLRFGGIAIWLMREAKQDIQYQDFVIPKGCFVVPFLSAVHLDEKIFNGAKNFNPWRWMEPENEEKRNWRTSPFYGPFGGGARFCPGAELARLQIALFLHYFVTNYRWTQMKEDRMSFFPSARLVNGFEICLTRRHDL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01679 484 SUPERFAMILY Cytochrome P450 39 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 Pfam Cytochrome P450 42 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 CDD CYP90-like 74 480 - -
Trre11g01679 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Trre11g01679 484 Gene3D Cytochrome P450 30 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PANTHER CYTOCHROME P450 26 37 457 - -
Trre11g01679 484 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS E-class P450 group IV signature 415 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS E-class P450 group IV signature 68 91 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 PRINTS E-class P450 group IV signature 279 305 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01679 484 FunFam Cytochrome P450 720B1 family 30 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01679 Trre-Chr11 16474265 16478275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01679 6 481 Cytochrome P450 AT1G73340 70.440 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01679 - - mtr:11414632 898.271