Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01624 ATGTCGTCTTCACCAAACAAACCTAAGAAACCGTTTCTTCCTTGGAAAACTCGCGTTGGTCTTTCGTTCGTTACAACTTTAACGGACGCTACACGTCGTTCTAACGGTACCGTTAATCGCCGTTTTCTCAATCTTCTAGATCGCAAATCTTCTCCTAATGCCACTCCCGTTAACGGCGTTTCAACCAAAGACGTTATTGTTAACGCCGAACATAATGTTTGGTTCCGTCTTTTCACTCCCATCGCCGGATCAACCGCCGGAGATGAAACTGGAACCGGAACGGCCTCTCTTCCGGTCATCTTTTTCTTCCACGGTGGTGGATTTACCTATCTCTCACCTGCATCTGTGGCTTACGATGCTGTTTGCCGTAGATTCTGCCGGAAAATCAATGCCGTTGTTGTCTCTGTTAACTACCGTCTCACACCGGAGTATCGGTACCCATCGCAATATGAAGACGGAGAATCTGTGCTGAAATTTCTCGACGAGAATAAATCCGTTTTACCGGAAAATGCTGACGTGTCAAAATGTTTCATTGCCGGAGACAGTGCTGGTGCAAATATAGCACATCATGTTGCGGTTCGGGTTTGCAAAGCAGGGCTCCAGAGAATCCGGGTTATCGGGTTGGTTTCCATCCAACCATATTTCGGCGGGGAGGAGCGGACTGAGTCGGAGATTCGTCTTGAAGGGTCACCTTTGGTGTCGATGGCGAGGACGGATTGGTTGTGGAAGGTGTTTTTGCCCGAGGGATCGGATCGGGATCATGGTGCAGCTAATGTTAGTGGGCCAAATGCGGAGGATTTGTCGGGTTTGAATTATCCAGATACACTTGTTTTTGTGGGCGGGTTTGACCCGTTAAGTGATTGGCAAAAGAGGTATTTTGATTGGTTGAAAAAATGTGGTAAAAATGCCGAGTTGATTGAATATCCGACTATGATTCATGCTTTTTATGTTTTCCCTGATTTGCCTGAGGCTACTCAATTGATTTTGCAAGTCAAGGATTTCATCAACAGAGTTTCGAACAATTCTAAAGGATGA 1035 0.4618 MSSSPNKPKKPFLPWKTRVGLSFVTTLTDATRRSNGTVNRRFLNLLDRKSSPNATPVNGVSTKDVIVNAEHNVWFRLFTPIAGSTAGDETGTGTASLPVIFFFHGGGFTYLSPASVAYDAVCRRFCRKINAVVVSVNYRLTPEYRYPSQYEDGESVLKFLDENKSVLPENADVSKCFIAGDSAGANIAHHVAVRVCKAGLQRIRVIGLVSIQPYFGGEERTESEIRLEGSPLVSMARTDWLWKVFLPEGSDRDHGAANVSGPNAEDLSGLNYPDTLVFVGGFDPLSDWQKRYFDWLKKCGKNAELIEYPTMIHAFYVFPDLPEATQLILQVKDFINRVSNNSKG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01624 344 SUPERFAMILY alpha/beta-Hydrolases 17 338 IPR029058 -
Trre11g01624 344 Pfam alpha/beta hydrolase fold 100 316 IPR013094 GO:0016787
Trre11g01624 344 PANTHER ARYLACETAMIDE DEACETYLASE 40 319 - -
Trre11g01624 344 Gene3D alpha/beta hydrolase 3 343 IPR029058 -
Trre11g01624 344 FunFam Probable carboxylesterase 18 4 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01624 Trre-Chr11 15903998 15905032 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01624 10 336 Carbohydrate Esterase AT3G05120 37.838 1.28e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01624 - - gmx:100812296 513.072