Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01622 ATGAGAATAAATCGTCACACTATCATTTCTAAATTCTATCATTTCATCGTTCACTTGAAAAACCTCATAACGACGGTTTTATCTTCACCAAACAAACCCAAACCCTTTCTTCCTTGGATAAATCACGTTGTTATTTTCTTCCTTACCACTTTTGCGGACGCTGCATGTCGTTCTAATGGCACCGTTAATCGCCGTTTTTTAAATTTGTTAGATCGCAAACCTAATCACACTCCTGTTAACGGCGTTTCCACTAAAGATGTTACCGTTAACGCCGAACATAACGTTTGGTTCCGTCTTTTCACACCCACCGGAGATGGAACCAAAACAAGTTCTCTTCCTGTCATCATTTTCTTCCACGGCGGTGGATTTACCTATCTCTCACCCGCCTTTGTTGGTTACGACATTGTTTGCCGTAGATTCTGCCGAAAAATTAACGCGGTTGTTGTCTCAGTCAACTACCGTCTCACACCGGAGCATCGGTACCCATCACAATACGAAGACGGAGCTTCCGTGTTGAAATTCCTAGATGAGAATAAATATGTTTTACCCGAAAATGCTGACGTTTCAAAATGTTTCATTGTCGGAGACAGTGCTGGTGCAAATATAGCACATCACATTGTGGTTCAGGTTTGCAAAACGGGGCTCAAGAATCTCCAGGTAATCGGGTTGGTTTCAATCCAACCATTTTTTGGAGGGGAGGAGCGGACTGAGGCGGAGATACGTCTTGAAGGTTCGCCATTGGTGTCAATGGCAAGGACAGATTGGCATTGGAAGGTGTTTTTGCCTGAAGGATCGGATCGGGATCTTGGTGCAGCTAATGCTAGTGGGCCGAATGCTGAGAATTTGTCGGGTTTGTATTATCCGGATACACTTGTTTTCGTGGCCGGGTTTGACCCATTAAAAGATTGGCAAAAAAGGTATTATGATTGGTTGAAAAAATGCGGTAAAAAATGTGAGTTGATTGAATATCCGACTATGATTCATGCTTTTTATATTTTCCCTAATTTGTCTGAGTCTACTCGGTTGATTTTGCAAGTCAAGGATTTCATCGATAGAGTCTCCAACAATTCGATCTAA 1077 0.4234 MRINRHTIISKFYHFIVHLKNLITTVLSSPNKPKPFLPWINHVVIFFLTTFADAACRSNGTVNRRFLNLLDRKPNHTPVNGVSTKDVTVNAEHNVWFRLFTPTGDGTKTSSLPVIIFFHGGGFTYLSPAFVGYDIVCRRFCRKINAVVVSVNYRLTPEHRYPSQYEDGASVLKFLDENKYVLPENADVSKCFIVGDSAGANIAHHIVVQVCKTGLKNLQVIGLVSIQPFFGGEERTEAEIRLEGSPLVSMARTDWHWKVFLPEGSDRDLGAANASGPNAENLSGLYYPDTLVFVAGFDPLKDWQKRYYDWLKKCGKKCELIEYPTMIHAFYIFPNLSESTRLILQVKDFIDRVSNNSI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01622 358 SUPERFAMILY alpha/beta-Hydrolases 44 353 IPR029058 -
Trre11g01622 358 Gene3D alpha/beta hydrolase 27 357 IPR029058 -
Trre11g01622 358 PANTHER ARYLACETAMIDE DEACETYLASE 57 334 - -
Trre11g01622 358 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 115 130 IPR002168 GO:0016787
Trre11g01622 358 Pfam alpha/beta hydrolase fold 115 331 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01622 Trre-Chr11 15880819 15881895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01622 57 351 Carbohydrate Esterase AT3G05120 36.452 1.33e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01622 - - gmx:102665243 463.381