Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01620 ATGTCATCACCAAACAAACCAAAACCCCTCCTTCCTTTGAAATCCCGCCTTTCGATTTCATTACTTATGACTTTAACGGACGCTTCCTGTCGATCTAACGGCACCGTTAACCGCCGTCTTCTCAACATTTTGGAACGCAAATCATCGGCTAAAGCCACTCCCATTAATGGTGTATCCACAAAAGATATAACTGTTAACGCCGAATGTAACATTTGGTTTCGTCTCTTCACTCCCACCAATGATGTTACCGGAGCTGAAGGTGACAACAAAACCGCCTCCCTTCCCGTTGTCATTTTCTTCCATGGAGGAGGCTTCACGTTTCTCTCTGCCGCTTCAACATCCTATGACGCCCTTAGTCGTCGATTTTGCCGAGAAATCAATGTCGTCGTTGTCTCTGTCAATTACCGCCGCACACTAGAGTATCGCTATCCGACACAATACGAAGACGGAGAAGCCGTACTAAGATTCCTTGATGAGAACAAATCCATTTTACCGGAAAATGCTGACGTGTCAACATGTTTCCTCGCAGGGGACAGTGCGGGTGGAAATCTAGCACATCATGTTGCGGTTTGGGCTTGCAAAGCCCGGCTACAAAAAATCCGGGTAATCGGGTTGATTTCAATCCAGCTGTTTTTTGGCGGGGAGGAGCGAACAGAGGCGGAGATTCGCCTTGAAGGGTCACTGATGATTTCGATGGGGAGGACGGATTGGATGTGGAAGGTATTTTTGCCAGAGGGATCGAATCGGGATCATGGAGCGGCTAATGTAAGCGGGCCGAATGCGGAGGATTTGTCGGGTTTGGATTTATTGGTTTTGTAA 819 0.4774 MSSPNKPKPLLPLKSRLSISLLMTLTDASCRSNGTVNRRLLNILERKSSAKATPINGVSTKDITVNAECNIWFRLFTPTNDVTGAEGDNKTASLPVVIFFHGGGFTFLSAASTSYDALSRRFCREINVVVVSVNYRRTLEYRYPTQYEDGEAVLRFLDENKSILPENADVSTCFLAGDSAGGNLAHHVAVWACKARLQKIRVIGLISIQLFFGGEERTEAEIRLEGSLMISMGRTDWMWKVFLPEGSNRDHGAANVSGPNAEDLSGLDLLVL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01620 272 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 97 113 IPR002168 GO:0016787
Trre11g01620 272 Gene3D alpha/beta hydrolase 2 272 IPR029058 -
Trre11g01620 272 Pfam alpha/beta hydrolase fold 97 267 IPR013094 GO:0016787
Trre11g01620 272 PANTHER ARYLACETAMIDE DEACETYLASE 38 256 - -
Trre11g01620 272 SUPERFAMILY alpha/beta-Hydrolases 41 265 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01620 Trre-Chr11 15848699 15849517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01620 5 269 Carbohydrate Esterase AT3G63010 37.226 1.04e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01620 - - gmx:100799285 342.043