Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01588 ATGAAACCACCTCAACCATCATATGCATTACCTTTAATAGGTCACCTCCATCTACTAGGAAACCAAATTCCCCTTGCAAGAATCTTTGCTTCATTTTCAGACAAATATGGTCCCATCTTCCAAATCCATTTAGGATCATATCCTGCCCTTGTTATTTCAAGCCAAGAAGCAATCAAAGAATGTTTCACAACAAATGACAAAGTCTTATGCTCAAGACCAAAGTCAAGTCATGGAATTTATCTTGGTTATAACTATGCTTCATTTGGAGCTGCACCTTATGGTCCATATTGGACTAAGCTAAGAAAATTAACCATGCTCGAGTTACTTTCATCTCGTCGCGTGGAATCATTGAAACATGTTTATGAATCCGAGATCGATACTTTGATTAAGGATCTAATGTTGTATATAAATGGAAAAAACAAGGTTAAGGTTGTGATTAGTGAATGGATGGAAAAGTTAACATTTAATATAATCACAAAAATGATTGGTCGGAAAAGGTATTTTGAGTATAATTTGCAAGATATGGATAATGAAGAAAATAGTCATATTGTGAAACTTATAAAAGAATATATGCATATTTCTGGTGAATTTGTTCCTTCAGATTTGATTCCAATTCTTGGTTGGTTTGGTTTTCAAGGACAAGTGCTTAAATCCATGAAAAGAGTTTCTAGAGATTTGGATAAACTTGTTGGAAGCTGGATTGAAGAACATGAAGTTGTTGGTGTGAATAAGTCAAATGATAAACATGATTTCATTGATGTTATGCTTTCTGTGATTGAAGATGATCATGCTTCTGGTCATAATCGTGATACTATCATCAAGGCAAATATTACGATGCTTATGTTGGCTGGGTCAGACACAATTTTCACAACAATGACATGGACCCTAGCCTTATTGTTGAATAATAAGAATGCTTTAAAGCTAGCACAAGAGGAAATTGATCATCACATAGGTCTCAAGCTTCTTAGTGGGATTCCATGTTTGGAGATGTTGGAGAAATCAAGAAGTTTGGAATTTGAAAGGGTAACCCGTAATGGAAGCAGCACCTACACTAAAACGCTCTGTACGAATTTTCAAAGTTGGAGGTTGAAACAGGATTTTTGCAGAATTCGTTTTGGGATAGGAACGAGGGCGGCAGAATTGTGCAGAAAATTCTGCTATATAATTAAAACAATTTCGGTGTTCCGGCAAGTTTCTGAGTCGTCATTATTTCCTTTCAAGTGTCGTTTCCAGGTTCCCCCGGTGTAG 1248 0.3606 MKPPQPSYALPLIGHLHLLGNQIPLARIFASFSDKYGPIFQIHLGSYPALVISSQEAIKECFTTNDKVLCSRPKSSHGIYLGYNYASFGAAPYGPYWTKLRKLTMLELLSSRRVESLKHVYESEIDTLIKDLMLYINGKNKVKVVISEWMEKLTFNIITKMIGRKRYFEYNLQDMDNEENSHIVKLIKEYMHISGEFVPSDLIPILGWFGFQGQVLKSMKRVSRDLDKLVGSWIEEHEVVGVNKSNDKHDFIDVMLSVIEDDHASGHNRDTIIKANITMLMLAGSDTIFTTMTWTLALLLNNKNALKLAQEEIDHHIGLKLLSGIPCLEMLEKSRSLEFERVTRNGSSTYTKTLCTNFQSWRLKQDFCRIRFGIGTRAAELCRKFCYIIKTISVFRQVSESSLFPFKCRFQVPPV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01588 415 PANTHER CYTOCHROME P450 82C3-RELATED 3 319 - -
Trre11g01588 415 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 PRINTS E-class P450 group I signature 57 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 PRINTS E-class P450 group I signature 33 52 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 PRINTS E-class P450 group I signature 153 171 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 Gene3D Cytochrome P450 3 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 Pfam Cytochrome P450 4 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01588 415 SUPERFAMILY Cytochrome P450 3 333 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01588 Trre-Chr11 15482204 15486858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01588 4 318 Cytochrome P450 AT4G31970 44.308 4.51e-82 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01588 - - gmx:100790675 459.144