Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01584 ATGGAGTGCAATAAGGACGAGGCTACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTCAATGAAAAGGACACATCGGGAGCAAAGAAGTTTGCTTTGAAAGCCCAAAATTTATTTCCTTCCCTTGAGGGTATTCCTCAAATGATAGCAACACTTGACGTGTATATTGCCGCTGAGAATAAAGTAAAAGGAGAAGCAGATTGGTATGGTATACTTGGTGTTAATCCGCGTGCTGATGATGACACAGTTAGAAAACATTATAGGAAGCTAGCTCTCATGCTTCACCCAGACAAGAACAAGTCTGTCGGAGCCGATGGGGCCTTTAAATTTATTTCAGAGGCGTGGAGTATACTGTCCGATAAGGCTAGAAGGGCAGCTTATGATGAAAAGATAAATGCAAAAGCACAGAAAGGTTCAACCATTTTCGGCGGTTCATCAGCAAAAGCGGCAGCAAATGGGGCTAACAATAGTAAAAAGAAGCCCCCTTCAAGTTCAAGGACTCAGAAAAATACTGCAAAAGAACAAGCTTCTTCTGCCAATAAATCGAAATCTACATTCTGGACTACTTGTCAGCGCTGTAAAATGCAATACGAGTATCTCCGAATGTATCTTAACCTTAAGCTCGTGTGTCCTAGCTGCCACGAAGCTTTTCTGGCTTTAGAAACTAACCCGCCTCCTGCAAGTGGTATCAGACCCGGCGCTACATTGAATTTTAAGCAAAAGCCCGATCACCAAGGACCTCATAAAAGCAAATCTAATGCTGGAAAAAACATGTCAGCTCCAAATGTTGGAGCAGGTTCTAACAAGAATAGTTTCCAGTGGGCTCCATTCTCGAATTCTGGCGTTTCTAATGTGGCTCAAGCTGCAAATGTGGTTCAGCAGGCATATCATAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCCGCTACCAAAAAGGAAGAGGCTTTAAGAAGGAAGCAGAATGTTTCCAAAAAAGGTTACTTTAATCCAGCTAAAAGGAAAAGGGGGGGCATGGAGGGAAATGGAGCATCTAACCTAGGCAATGGTATGAAGAAGTTCAACTCTACTAGAGATCTCTCCCCAGTTGAACTTCAGAATCTTCTTGTTGAGAAAGCTAGAAAAGAAATTAGCAAGAAAGTCAGAGAGTGTCAGTCAAATACTGTTGATAAATCAGTGGCGAAAAAGAGTGGAGATTGCTTCCAGAAAGAAGACCGGAAAGGAGAATTTTCAGCAAGAAACTCTGAGATCTGTACTCGAAATAGCATTGGGAAGTCAGAAGGTGCGAAGAATAGTTTGCAGGCTAGCACGTCATTTGCAGCTCCTACAATTGATAGCAATTGCATGGAAATTTTGGATTCAATGCTTGTAGATTTTCCTGATACTGATTTTCATGATTTTTTCAAGGATCGAACTGAAAGGTCTTTTGGTGAAAATCAAGTATGGACTGCATATGAAGGTGATGATGGGATGCCTCGACGTTATGCTCTGATTCACAAAGTGATCTCTCTGAATCCATTCAAGCTGCAGATCAGTTGGCTCTACCCAAATACCAACAGCGGTGAACCAGGCCACCAAAATTGGATTGCGTTAGGCTTTTCAAAAACTTGTGGGGATTTCAGGATAGGTAAACGCGAGATCTATGACTCGATCAATTATTTTTCTCAAAAGGTTAGGTGGATAAAAGGTAACAATGGAGCTATTTGTATATATCCCAAAAAAGGAGAGGTTTGGGCCATCTATAGGAATTGGTCTCCTAACTGGAATGAGCTAATAGCAGGTGATGTGATACACAAGTTTATAATGGTTGAAGTACTTGAGGATTTTGTCGAAGAACACGGGGTAACTGTTATTCCTTTGGTCAAGGTGGCAGGGTTCAAGGCAGTATTTCACCACCACTTTGATGAGAAAGAGATCAAAATCATTCCGAGGAAGGAGATGCTTCGATTCTCTCATCAGGTACCTTCATACGTACTTACTGGCGAAGAAGCTGCTAATGCTCCAAAAGGTTGTAGGGTGCTGGACCCAGCTGCTACTCCATGTGAACTTCTTGAGGTAATAAAAGTCGCGCAGTTGGAAAGCATAGTGGACAACGTGGATGGTATCGCTGAAGAAGCTATTTGTGAGGAAATGGCCAGTGATACGGGACAACTTGGGGGAGCAAAGGAGGGATCGAAGAAAGTTATTCATAAAATGGAAACTTCAGAAGAGGACAGAGGGAAGAAGATATGCATAGGCTTGTAG 2238 0.4249 MECNKDEATRAKEIAERKFNEKDTSGAKKFALKAQNLFPSLEGIPQMIATLDVYIAAENKVKGEADWYGILGVNPRADDDTVRKHYRKLALMLHPDKNKSVGADGAFKFISEAWSILSDKARRAAYDEKINAKAQKGSTIFGGSSAKAAANGANNSKKKPPSSSRTQKNTAKEQASSANKSKSTFWTTCQRCKMQYEYLRMYLNLKLVCPSCHEAFLALETNPPPASGIRPGATLNFKQKPDHQGPHKSKSNAGKNMSAPNVGAGSNKNSFQWAPFSNSGVSNVAQAANVVQQAYHKVKRDREEAQAATKKEEALRRKQNVSKKGYFNPAKRKRGGMEGNGASNLGNGMKKFNSTRDLSPVELQNLLVEKARKEISKKVRECQSNTVDKSVAKKSGDCFQKEDRKGEFSARNSEICTRNSIGKSEGAKNSLQASTSFAAPTIDSNCMEILDSMLVDFPDTDFHDFFKDRTERSFGENQVWTAYEGDDGMPRRYALIHKVISLNPFKLQISWLYPNTNSGEPGHQNWIALGFSKTCGDFRIGKREIYDSINYFSQKVRWIKGNNGAICIYPKKGEVWAIYRNWSPNWNELIAGDVIHKFIMVEVLEDFVEEHGVTVIPLVKVAGFKAVFHHHFDEKEIKIIPRKEMLRFSHQVPSYVLTGEEAANAPKGCRVLDPAATPCELLEVIKVAQLESIVDNVDGIAEEAICEEMASDTGQLGGAKEGSKKVIHKMETSEEDRGKKICIGL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01584 745 Coils Coil 298 318 - -
Trre11g01584 745 MobiDBLite consensus disorder prediction 250 266 - -
Trre11g01584 745 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Trre11g01584 745 Gene3D DnaJ domain 63 188 IPR036869 -
Trre11g01584 745 MobiDBLite consensus disorder prediction 326 346 - -
Trre11g01584 745 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Trre11g01584 745 MobiDBLite consensus disorder prediction 222 266 - -
Trre11g01584 745 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Trre11g01584 745 SMART dnaj_3 65 122 IPR001623 -
Trre11g01584 745 MobiDBLite consensus disorder prediction 144 180 - -
Trre11g01584 745 PANTHER BNAC03G44070D PROTEIN 1 678 - -
Trre11g01584 745 Pfam DnaJ domain 66 127 IPR001623 -
Trre11g01584 745 CDD DnaJ 66 119 IPR001623 -
Trre11g01584 745 PRINTS DnaJ domain signature 68 86 IPR001623 -
Trre11g01584 745 PRINTS DnaJ domain signature 86 101 IPR001623 -
Trre11g01584 745 PRINTS DnaJ domain signature 102 122 IPR001623 -
Trre11g01584 745 Pfam Domain of unknown function (DUF3444) 454 661 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01584 Trre-Chr11 15459388 15461625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01584 4 335 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.912 4.99e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01584 - - lja:Lj2g3v0520120.1 959.133