Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01526 ATGGGAGAAGTGAAGCTAATTGCCACTCCTCAAAGCTTCCCTTGTGCTAGAATTGAGTGGGCTTTAAGGATAAAAGGTGTTGAATATGAATATATACAAGAAGATTTATTAAATAAGAGTCCTTTGCTTATTGAATCAAATCCTGTTTACAAGAAAGTTCCAGTGCTACTTCATGATGGAAAATCAATTGCTGAATCACTTGTTATTCTTGAATACATAGATGAGACATGGAAGGACAACCCTTTGTTGCCATTAGATCCATATGAGAGAGCACAGGCTCGTTTTTGGGCTAAATTTATTGATGAAAAGTGTGTGGTTGGTGTATGGGAGGCATGTGTGGCTCAGGGAGAAGAGAAGAAAAAAGCTGTGGATGCTGCATTGGAGTTACTAGCATTTCTTGAGAAGCATATTCAAGGGAAAAAGTTATTTGGAGAGAAAATAGGGTATCTTGATATAGTGGCTGGTTGGATATCATATTGGCTTAATGTCCTTGAAGAACTTGGAGAAATTGAGTTACTCACTGCTGAAAGGTTTCCATCTCTTCATGAGTGGAGCCATAACTTCATCCAAACGTCACCTATCAAAGATTGCATTCCACCAAGGGAAATGGTGGTTGAATATTTTAGTTTTGGCATCAACTATGTTCGTTCCTTGGCATCCAATGAATAG 669 0.3842 MGEVKLIATPQSFPCARIEWALRIKGVEYEYIQEDLLNKSPLLIESNPVYKKVPVLLHDGKSIAESLVILEYIDETWKDNPLLPLDPYERAQARFWAKFIDEKCVVGVWEACVAQGEEKKKAVDAALELLAFLEKHIQGKKLFGEKIGYLDIVAGWISYWLNVLEELGEIELLTAERFPSLHEWSHNFIQTSPIKDCIPPREMVVEYFSFGINYVRSLASNE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01526 222 SUPERFAMILY GST C-terminal domain-like 75 210 IPR036282 -
Trre11g01526 222 CDD GST_N_Tau 4 77 - -
Trre11g01526 222 FunFam Tau class glutathione S-transferase 83 217 - -
Trre11g01526 222 FunFam Tau class glutathione S-transferase 1 85 - -
Trre11g01526 222 CDD GST_C_Tau 87 210 IPR045074 GO:0004364|GO:0006749
Trre11g01526 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 205 IPR045073 -
Trre11g01526 222 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Trre11g01526 222 SFLD Glutathione Transferase (cytosolic) 1 209 IPR040079 -
Trre11g01526 222 SFLD Main.3: Omega- and Tau-like 1 209 IPR045073 -
Trre11g01526 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 207 IPR010987 -
Trre11g01526 222 Pfam Glutathione S-transferase, N-terminal domain 15 75 IPR004045 -
Trre11g01526 222 Gene3D Glutaredoxin 1 82 - -
Trre11g01526 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Trre11g01526 222 Gene3D - 83 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01526 Trre-Chr11 14862596 14863983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01526 3 208 Glutathione S-transferase Gene Family AT2G29420 48.309 8.90e-69 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01526 K00799 - gmx:547587 366.696