Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01497 ATGGGAAGAAATAAGATGGTTGTTGTATCAGATTTTGTTCTATCATTCATGTGGGTGTGTTCTAGTATTCTCCTAAAAACATTTGTAAAAAAAATTATAAGCATTAATCATTCTCATGTGGTTGAGATTGTGAAAATTGGTTTTTCCATAGCCAACATGTTCTTCTATGCTTTTCTTGCTAAATTTTTTCGTGGTGGAGCTAACAATCCTCTTGCTACTTTGGTTGATGCTATCTCTGGAGATTTTCATAACTTTGTTTTATGCATTGGTTCCAGAATTCCTGCTCAGGTGATTGGATACATTGTCGGAGTAAAACTTCTTACAGATATCATCCCTGAAATAGGACACGGGCCACGTTTGAATGTTGACATTTACCGAGGAGCATTGACCGAAGGATTGTTAACATTTACAATTGCAGTCATTACACTTGGGATTACTGCAACAAAAATTCGTAGAAGTTTCTTCATGAAAACATGGATTTCTAGCATCATGAAGCTAATACTTCATAAACTTGGTTCTAATTTGACTGGTGGTTGTATGAACCCTGCATCGGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAACACATCCTTGTATACTGGTTTGCCCCTATAAAGGCCACTCTTTTGGCAGTTTGGATATTCAAATTTCTAGTACGACATGTGAAAAAAAAGATAAAATGA 696 0.3649 MGRNKMVVVSDFVLSFMWVCSSILLKTFVKKIISINHSHVVEIVKIGFSIANMFFYAFLAKFFRGGANNPLATLVDAISGDFHNFVLCIGSRIPAQVIGYIVGVKLLTDIIPEIGHGPRLNVDIYRGALTEGLLTFTIAVITLGITATKIRRSFFMKTWISSIMKLILHKLGSNLTGGCMNPASVMGWAFARGDHISKEHILVYWFAPIKATLLAVWIFKFLVRHVKKKIK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01497 231 PANTHER AQUAPORIN SIP2-1-RELATED 5 229 IPR044226 GO:0015267
Trre11g01497 231 Pfam Major intrinsic protein 8 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01497 231 SUPERFAMILY Aquaporin-like 8 225 IPR023271 -
Trre11g01497 231 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01497 231 PRINTS Major intrinsic protein family signature 162 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01497 231 PRINTS Major intrinsic protein family signature 202 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01497 231 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01497 231 Gene3D Glycerol uptake facilitator protein. 6 231 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01497 Trre-Chr11 14544742 14546152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01497 1 229 Major Intrinsic Protein MIP AT3G56950 52.174 1.92e-80 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01497 K09875 - gmx:100786138 309.686