Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01495 ATGGAAAGAAATAAGATGGTTGTTGTATCAGATTTTGTTCTATCATTCATCTGGGTGTGTTCTAGTATTCTCCTAAAAACATTTGTAAAAAAAATTATAAGCATTAATCATTCTCATGTGGTTGAGATTGTGAAAATTGGTTTTTCCATAGCCAACATGTTCTTCTATGCTTTTCTTGCTAAATTTTTTCGTGGTGGAGCTAACAATCCTCTTGCTACTTTGGTTGATGCTATCTCTCGAGATTTTCATAACTTTGTTTTTTGCATTGGTTCCAGAATTCCTGCTCAGGTGATTGGATACATTGTCGGAGTAAAACTTCTTACATATATCATCCCTGAAATAGGACACGGGCCACGTTTGAATGTTGACATTTACCGAGGAGCATTAACCGAAGGATCGTTAACATTTACAATTGCAGTAATTACACTTGGGATTACTGCAACAAAAATTCGTAGAAGTTTCTTCATGAAAACATGGATTTCTAGCATCATGAAGCTAATACTTCATAAACTTGGTTCTAATTTGACCGGTGGTTGTATGAACCCTGCATCGGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAGCACATCCTTGTACGACATGTGAAAAAAAGATAG 630 0.3651 MERNKMVVVSDFVLSFIWVCSSILLKTFVKKIISINHSHVVEIVKIGFSIANMFFYAFLAKFFRGGANNPLATLVDAISRDFHNFVFCIGSRIPAQVIGYIVGVKLLTYIIPEIGHGPRLNVDIYRGALTEGSLTFTIAVITLGITATKIRRSFFMKTWISSIMKLILHKLGSNLTGGCMNPASVMGWAFARGDHISKEHILVRHVKKR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01495 209 Gene3D Glycerol uptake facilitator protein. 5 204 IPR023271 -
Trre11g01495 209 Pfam Major intrinsic protein 8 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01495 209 PANTHER AQUAPORIN SIP2-1-RELATED 4 204 IPR044226 GO:0015267
Trre11g01495 209 SUPERFAMILY Aquaporin-like 10 195 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01495 Trre-Chr11 14531706 14533110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01495 7 203 Major Intrinsic Protein MIP AT3G56950 52.020 1.46e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01495 K09875 - gmx:100786138 268.47