Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01494 ATGAGAAGAAGATTTGTTGTTGTATCAGATTTTGCACTATCATTCATGTGGGTGATTGGATATATTGTTGGAGTGAAACTTCTTATGAATACAATTCCTGAAGTAGGGCATGGACCACGTTTGAATGTTGACATTTATCGAGGAGCATTGACTGAAGGAATACTAACCTTTGCAATTGTAGTCATTACACTTGGAATTGCTGCAACAAAAATTCGTGGAAGTTTCTTCTTGAAGACATGGATTTCTAGCATCATTAAGTTAACACTTCATAAACTTGGTTCGGATTTGACTGGTGGTTGTATGAACCCAGCATCTGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAGCACCTCTTTGTATATTGGCTTGCCCCTATAGAGGCTACTCTTTTAGCAGTTGGGATGTTCAAATTGCTATTACGACATGTAAAAAATAATAAAATGGGCTCAAAAAATAAATCAGATTGA 480 0.3729 MRRRFVVVSDFALSFMWVIGYIVGVKLLMNTIPEVGHGPRLNVDIYRGALTEGILTFAIVVITLGIAATKIRGSFFLKTWISSIIKLTLHKLGSDLTGGCMNPASVMGWAFARGDHISKEHLFVYWLAPIEATLLAVGMFKLLLRHVKNNKMGSKNKSD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01494 159 PANTHER AQUAPORIN SIP2-1-RELATED 18 159 IPR044226 GO:0015267
Trre11g01494 159 Gene3D Glycerol uptake facilitator protein. 2 157 IPR023271 -
Trre11g01494 159 PRINTS Major intrinsic protein family signature 51 69 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01494 159 PRINTS Major intrinsic protein family signature 83 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01494 159 PRINTS Major intrinsic protein family signature 123 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01494 159 SUPERFAMILY Aquaporin-like 19 148 IPR023271 -
Trre11g01494 159 Pfam Major intrinsic protein 19 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01494 Trre-Chr11 14525341 14526959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01494 18 159 Major Intrinsic Protein MIP AT3G56950 61.268 7.17e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01494 K09875 - gmx:100786138 214.542