Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01492 ATGGAAAGAAATAAGATGGTTGTTGTATCAGATTTTGTTCTATCATTCATGTGGGTGTGTTCTAGTGTTCTCCTAAAAACATTTGTAAAAAAAGTTATAAGCATTAATCATTCTCATGTGGTTGAGATTGTGAAAATTGGTTTTTCCATAGTCAACATGTTCTATGGTTTTCTTGCTAAAGTTTTTCGTGGTGGAGCTAACAATCCTCTTGCTACTTTGGTTTTCATAACTTTGTTTTTTGCATTGGTGATTGGATACATTGTCGGAGTAAAACTTCTTACAGATATCATCCCTGAAATAGGACACGGACCACGTTTGAATGTTGAAATTTATCGAGGAGCATTGACCGAAGGATTGTTAACATTTACAATTGCATTAATTACACTTGGGATTACTGCAACAAAAATTCGTAGAAGTTTCTTCATGAAAACATGGATTTCTAGCATCATGAAGCTAATACTTCATAAACTTGGTTCTAATTTGACCGGTGGTTGTATGAACCTTGCATCTGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAGCACATCCTTGTATACTGGCTTGCCCCTATAAAGGCCACTCTTTTGGCAGTTTGGATATTCAAATTTCTAGTACGACATGTGAAAAAAAGATAA 648 0.3565 MERNKMVVVSDFVLSFMWVCSSVLLKTFVKKVISINHSHVVEIVKIGFSIVNMFYGFLAKVFRGGANNPLATLVFITLFFALVIGYIVGVKLLTDIIPEIGHGPRLNVEIYRGALTEGLLTFTIALITLGITATKIRRSFFMKTWISSIMKLILHKLGSNLTGGCMNLASVMGWAFARGDHISKEHILVYWLAPIKATLLAVWIFKFLVRHVKKR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01492 215 PANTHER AQUAPORIN SIP2-1-RELATED 4 214 IPR044226 GO:0015267
Trre11g01492 215 Gene3D Glycerol uptake facilitator protein. 6 215 IPR023271 -
Trre11g01492 215 SUPERFAMILY Aquaporin-like 8 211 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01492 Trre-Chr11 14478105 14479632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01492 7 215 Major Intrinsic Protein MIP AT3G56950 50.893 6.86e-69 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01492 K09875 - jre:109005443 247.284