Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01491 ATGAGAAGAAGATTTGTTGTTGTATCAGATTTTGCACTATCATTCATGTGGGTATGTTCTGGTGTTCTTCTAAAGTCATTTGTAAAAAGAAATATGAGCTTTAATCATTCTCATGTGGCTGAGATTGTGAAGATTGGTTTTTCCATAGCCAACATGTTTTTCTATGCTTTTATTGCTAAAATATTTCATGGTGGGACTAATAATCCTCTTGCTACTTTGGTTGATGCTATCTCCGGAGATTTTCGTAATTTCATTTTTTGCATTGCTTCAAGAATTCCTGCTCAGGTGATTGGATATATTGTTGGAGTGAAACTTCTTATGAATACAATTCTTGAAGTAGGGCATGGACCACGTTTGAATGTTGACATTTATCGAGGAGCATTGACTGAAGGAATACTAACATTTGCAATTGTAGTCATTACACTTGGAATTGCTGCAACAAAAATTCGTGGAAGTTTCTTCTTGAAGACATGGATTTCTAGCATCATTAAGTTAACACTTCATAAACTTGGTTCTGATTTGACTGGTGGTTGTATGAACCCTGCATCTGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAGCACCTCTTTGTATATTGGCTTGCACCTATAGAGGATACTCTTTTAGCAGTTGGGATGTTCAAATTGCTATTACGACATGTAAAAAAACATAAAATGGGCTCAAAAAATAAATCAGATTGA 714 0.3571 MRRRFVVVSDFALSFMWVCSGVLLKSFVKRNMSFNHSHVAEIVKIGFSIANMFFYAFIAKIFHGGTNNPLATLVDAISGDFRNFIFCIASRIPAQVIGYIVGVKLLMNTILEVGHGPRLNVDIYRGALTEGILTFAIVVITLGIAATKIRGSFFLKTWISSIIKLTLHKLGSDLTGGCMNPASVMGWAFARGDHISKEHLFVYWLAPIEDTLLAVGMFKLLLRHVKKHKMGSKNKSD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01491 237 Pfam Major intrinsic protein 7 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01491 237 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01491 237 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01491 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01491 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01491 237 SUPERFAMILY Aquaporin-like 7 227 IPR023271 -
Trre11g01491 237 Gene3D Glycerol uptake facilitator protein. 5 237 IPR023271 -
Trre11g01491 237 PANTHER AQUAPORIN SIP2-1-RELATED 3 237 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01491 Trre-Chr11 14460846 14462347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01491 1 237 Major Intrinsic Protein MIP AT3G56950 52.101 6.73e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01491 K09875 - gmx:100786138 314.309