Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01487 ATGGCTTACTCTAAAATTTTCTTTTTCTCTATACTTGTTGGATTCCTCTGTTTTGTGAATGTCAAGGCACAAAACTCTCCTTTTTTTCTGCTTTCAAGTTGTTCCAACGACAGCACCACAGCCAATAGCACCTTCCAAATCAATCTCATGACCCTCCTCTCTTCCTTGTCATCGAAAGCCGTAGGAAACACCGAATTCTACAACACCACTGTCACTAGTATAAACCCCTCTGATTCAGTCTATGGATTGTTCATGTGTCGGGGGGATATTGTACCCTCGAATCTCTGTCATGAATGTGTAGTTAATGCTACTAAAAAACTTCCCTTAGATTGCTCTTTGTCCAGACGAGCTGTGATTTGGTACGATGAGTGCATGGTTCGATACTCTAACAACTCTTTCTTTTCCATAGTTAATATAAATACTGATGAAGCAGCCCACCCACTTATTGGTGACGAAAACAAGAAGTTTGCAACGCGTGAGGCAACTATTTCGGCATTTCAGTCCGTTTACTGTCTAGCTCAGTGCACACCAGACTTGTCACCCAATGATTGCAGAAGTTGTCTTAGTAGTGCTATTGGGTATCTTCCAAGGTGTTGTGATGATGGAAAGCAGGGTTGGAGAATTTTATTCCCCAGCTGCAGTGTTAGGTATGAACTATATCCTTTTTATAGGACAAGTAATGTTTCATCAACAAATGAGCTTGTGCCTGAAACAAATGATTCAAAACTAGATTCAAGATTTTCGGAAGATCCATTTTATCTTTCCTATAATTGCTCAAATAAGAATACTAGCTCTTACAATATATACTTGAAGTTACTTCTCTCTGATTTATCTTCCAACGCCACGAGCGGAAAAACATTTCATAAAGCTTCAAAGGAAATGTTGTATGGCCTATACATGTGTCGAGGTGACCTTCCATCTCGCCTATGTGGTCAATGTGTCAAAAATGCAACAGATAAAATATACTCGATGTGTCGTTCAAAACAAGAGGGTATAATTTGGTATAGCCACTGCTGGCTTAGGTATTCTTATCGTTATTTCTTCTCTAACATTGAAACAAGTCCTATGTACCGTGATATAAATATCACCAACTATTCCATACCCGACCAAAATTTGTTCACTAGTAGATTATCGAATCAGTTATCTCAACTTGTGAATCATACAGGGGATAGTAGTGAAAGATATGTAACAAATTCATTAAAATTGAATGGCATACAAACCTTGTATACTCTTCAACAATGTACACAGGATTTGTCTAGTGACCAATGCATTTCATGTCTACAAGATATGATCGGTAAAGCAATTCCATGGTTATTTTTGGGAAGTGTTGGGGGAAGAATTCTGTATCCCAGTTGTAATCTGAGGTTTGAATTGTTTCAATTTTACGTGGAGGAGGGCGAAGCTCAGGTTCCTAGGAGTCCTACTCCGTTATTGGGAGACGCAGAGAAGGGGAAGTTGGGAAGAATTATCGGAATTGTTGTCGCTACCGTTATTTTTGTAATGCTCTTTTCTACCGGCTATTATTTCCTAAAGAGAAGGCAAAGAAAGAGCCGTAGGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGTCGCTTTAGAACCACTGCAGTTTGATTGGGCGGTAATTGAAGCAGCAACCAACAACTTTTCTAATGACAATTACATTGGAAAAGGCGGGTTTGGAGAGGTATACAAGGGTATGCTAATTGATGGACGAGAAGTGGCTGTAAAGAGACTTTCAAGAAGTTCTACGCAAGGTGCAGAGGAGTTCAAGAATGAAGTTTTATTGATAGCCAAGCTTCAACATAGAAATTTAGTGACATTTATTGGTTTCTGCCTTGAAGAACATGAGAAAATACTTATTTATGAATTTGTTCCCAACAAAAGTCTTGATTACTTTTTATTTGATTCTCGACGACAAAAGTTGTTAACTTGGGTTGAACGCTTTAACATTATAGGAGGAATTGCTCGAGGAATTCTTTATTTGCATGAACATTCTCGACTTAAAGTTATACATCGTGATCTCAAACCTAGTAATATTCTATTAGATGAAAATATGATCCCTAAAATATCCGATTTTGGTTTGGCTCGAATTGTCGAAATAAGTCAAGATGAAGGAAGTACAAATAGAATTGTGGGAACATATGGTTATATGTCTCCGGAATATGTAATGTTTGGACAATTTTCTGAAAAATCCGACGTTTATAGTTTTGGAGTCATGGTTTTAGAGATTGTTGCCGGAAAGAAGAATATAAGTTCACATACACCTCATCATGTTGCTGATAGCCTCTTGAGCTATGTTTGGAGACAATGGAAGGATCAAACCCCTTTAAGTATATTGGACCCAAATATTAAAGAAGATTATTCTTCAAACATTGAAGTCATTAGGTGCATTCAAATTGGTCTATTATGTGTTCAAAATGACTCAGAAGCTAGACCAACAATGGTGACGGTTGCTTCATATCTTAGCAGTAATTCAATTGAATTACCAATTCCACAAGAACCTGCTTTTTTGTTGCATGGTAGAACGTATTCAAGTTCTACTCAATCTGCCAATAGTTCTGCACTATTGTCTATCAATGAAATGACTACAAGTACTTTTCTTCCACGATAG 2616 0.3758 MAYSKIFFFSILVGFLCFVNVKAQNSPFFLLSSCSNDSTTANSTFQINLMTLLSSLSSKAVGNTEFYNTTVTSINPSDSVYGLFMCRGDIVPSNLCHECVVNATKKLPLDCSLSRRAVIWYDECMVRYSNNSFFSIVNINTDEAAHPLIGDENKKFATREATISAFQSVYCLAQCTPDLSPNDCRSCLSSAIGYLPRCCDDGKQGWRILFPSCSVRYELYPFYRTSNVSSTNELVPETNDSKLDSRFSEDPFYLSYNCSNKNTSSYNIYLKLLLSDLSSNATSGKTFHKASKEMLYGLYMCRGDLPSRLCGQCVKNATDKIYSMCRSKQEGIIWYSHCWLRYSYRYFFSNIETSPMYRDINITNYSIPDQNLFTSRLSNQLSQLVNHTGDSSERYVTNSLKLNGIQTLYTLQQCTQDLSSDQCISCLQDMIGKAIPWLFLGSVGGRILYPSCNLRFELFQFYVEEGEAQVPRSPTPLLGDAEKGKLGRIIGIVVATVIFVMLFSTGYYFLKRRQRKSRRTILRENFGEESVALEPLQFDWAVIEAATNNFSNDNYIGKGGFGEVYKGMLIDGREVAVKRLSRSSTQGAEEFKNEVLLIAKLQHRNLVTFIGFCLEEHEKILIYEFVPNKSLDYFLFDSRRQKLLTWVERFNIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDEGSTNRIVGTYGYMSPEYVMFGQFSEKSDVYSFGVMVLEIVAGKKNISSHTPHHVADSLLSYVWRQWKDQTPLSILDPNIKEDYSSNIEVIRCIQIGLLCVQNDSEARPTMVTVASYLSSNSIELPIPQEPAFLLHGRTYSSSTQSANSSALLSINEMTTSTFLPR 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01487 871 ProSitePatterns Protein kinases ATP-binding region signature. 556 578 IPR017441 GO:0005524
Trre11g01487 871 FunFam Cysteine-rich receptor-like protein kinase 25 131 222 - -
Trre11g01487 871 ProSiteProfiles Gnk2-homologous domain profile. 353 461 IPR002902 -
Trre11g01487 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 671 683 IPR008271 GO:0004672|GO:0006468
Trre11g01487 871 ProSiteProfiles Protein kinase domain profile. 550 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g01487 871 SMART serkin_6 550 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g01487 871 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Trre11g01487 871 Gene3D - 252 347 IPR038408 -
Trre11g01487 871 Gene3D - 27 133 IPR038408 -
Trre11g01487 871 Gene3D - 354 461 IPR038408 -
Trre11g01487 871 Gene3D - 139 222 IPR038408 -
Trre11g01487 871 ProSiteProfiles Gnk2-homologous domain profile. 27 133 IPR002902 -
Trre11g01487 871 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 27 130 - -
Trre11g01487 871 Pfam Salt stress response/antifungal 258 343 IPR002902 -
Trre11g01487 871 Pfam Salt stress response/antifungal 368 457 IPR002902 -
Trre11g01487 871 Pfam Salt stress response/antifungal 155 220 IPR002902 -
Trre11g01487 871 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Trre11g01487 871 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 256 864 - -
Trre11g01487 871 Gene3D Transferase(Phosphotransferase) domain 1 626 830 - -
Trre11g01487 871 Pfam Protein kinase domain 552 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g01487 871 CDD STKc_IRAK 556 823 - -
Trre11g01487 871 FunFam cysteine-rich receptor-like protein kinase 10 626 830 - -
Trre11g01487 871 SUPERFAMILY Protein kinase-like (PK-like) 534 852 IPR011009 -
Trre11g01487 871 Gene3D Phosphorylase Kinase; domain 1 511 625 - -
Trre11g01487 871 ProSiteProfiles Gnk2-homologous domain profile. 153 222 IPR002902 -
Trre11g01487 871 ProSiteProfiles Gnk2-homologous domain profile. 248 347 IPR002902 -
Trre11g01487 871 FunFam Cysteine-rich receptor-like protein kinase 25 355 461 - -
Trre11g01487 871 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 511 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01487 Trre-Chr11 14442144 14446347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01487 248 871 Receptor kinase-like Gene Family AT4G05200 43.769 2.54e-174 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g01487 Pkinase 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01487 - - gmx:100798426 1062.37