Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01485 ATGTTCTTCTATGGTTTTCTTGCTAAAGTTTTTCGTGGTGGAGCTAACAATCCTCTTGCTACTTTGGTTGATGCTATCTCTGGAGATTTTCATAACTTTGTTTTTTGCATTGATATCATCCTTGAAATAGGACACGGACCACGTTTGAATGTTGAAATTTATCGAGGAGCATTGACCGAAGGATTGTTAACATTTACAATTGCATTAATTACACTTGGGATTACTGCAACAAAAATTCGTAGAAGTTTCTTCATGAAAACATGGATTTCTAGCATCATGAAGCTAATACTTCATAAACTTGGTTCTAATTTGACCGGTGGTTGTATGAACCCTGCATCGGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAGCACATCCTTGTATACTGGCTTGCCCCTATAAAAGCCACTCTTTTGGCAGTTTGGATATTCAAATTTCTAGTACGACATGTGAAAAAAAGATAA 477 0.3732 MFFYGFLAKVFRGGANNPLATLVDAISGDFHNFVFCIDIILEIGHGPRLNVEIYRGALTEGLLTFTIALITLGITATKIRRSFFMKTWISSIMKLILHKLGSNLTGGCMNPASVMGWAFARGDHISKEHILVYWLAPIKATLLAVWIFKFLVRHVKKR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01485 158 PANTHER AQUAPORIN SIP2-1-RELATED 1 37 IPR044226 GO:0015267
Trre11g01485 158 SUPERFAMILY Aquaporin-like 12 154 IPR023271 -
Trre11g01485 158 Pfam Major intrinsic protein 52 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01485 158 PRINTS Major intrinsic protein family signature 91 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01485 158 PRINTS Major intrinsic protein family signature 59 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01485 158 PRINTS Major intrinsic protein family signature 131 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01485 158 Gene3D Glycerol uptake facilitator protein. 42 158 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01485 Trre-Chr11 14404451 14405869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01485 1 158 Major Intrinsic Protein MIP AT3G56950 52.542 2.08e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01485 K09875 - gmx:100786138 217.238