Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01484 ATGTTCTTCTATGGTTTTCTTGCTAAAGTTTTTCGTGGTGGAGCTAACAATCCTCTTGCTACTTTGGTTGATGCTATCTCTGGAGATTTTCATAACTTTGTTTTTTGCATTGGTTCTGAAAATCGACACGGACCACGTTTGAATGTTGAAATTTATCGAGGAGCATTGACCGAAGGATTGTTAACATTTACAATTGCATTAATTACACTTGGGATTACTGCAACAAAAATTCGTAGAAGTTTCTTCATGAAAACATGGATTTCTAGCATCATGAAGCTAATACTTCATAAACTTGGTTCTAATTTGACCGGTGGTTGTATGAACCCTGCATCGGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAGCACATCCTTGTATACTGGCTTGCCCCTATAAAAGCCACTCTTTTGGCAGTTTGGATATTCAAATTTCTAGTACGACATGTGAAAAAAAGATAA 471 0.3758 MFFYGFLAKVFRGGANNPLATLVDAISGDFHNFVFCIGSENRHGPRLNVEIYRGALTEGLLTFTIALITLGITATKIRRSFFMKTWISSIMKLILHKLGSNLTGGCMNPASVMGWAFARGDHISKEHILVYWLAPIKATLLAVWIFKFLVRHVKKR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01484 156 Gene3D Glycerol uptake facilitator protein. 19 156 IPR023271 -
Trre11g01484 156 PRINTS Major intrinsic protein family signature 129 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01484 156 PRINTS Major intrinsic protein family signature 57 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01484 156 PRINTS Major intrinsic protein family signature 89 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01484 156 Pfam Major intrinsic protein 49 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01484 156 PANTHER AQUAPORIN SIP2-1-RELATED 1 38 IPR044226 GO:0015267
Trre11g01484 156 SUPERFAMILY Aquaporin-like 12 152 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01484 Trre-Chr11 14404451 14405869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01484 1 156 Major Intrinsic Protein MIP AT3G56950 52.542 4.99e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01484 K09875 - gmx:100786138 209.534