Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01483 ATGAGCTTTAATCATTCTCATGTGGCTGAGTTTGTGAAGATTGGTTTTTCCATAGCCAACATGTTTTTCTATGCTTTTATTGCTAAAATATTTCATGGTGGGACTAATAATCCTCTTGCTACTTTGGTTGATGCTATCTCCGGAGATTTTCGTAATTTCATTTTTTGCATTGCTTCAAGAATTCCTGCTCAGGTGATTGGATATATTGTTGGAGTCAAACTTCTTATGAATACAATTCCTGAAGTAGGGCATGGACCACGTTTGAATGTTGACATTTATCGAGGAGCATTGACTGAAGGAATACTAACATTTGCAATTGTAGTCATTACACTTGGAATTGCTGCAACAAAAATTCGTGGAAGTTTCTTCTTGAAGACATGGATTTCTAGCATCATTAAGTTAACACTTCATAAACTTGGTTCTGATTTGACCGGTGGTTGTATGAACCCTGCATCGGTAATGGGATGGGCTTTTGCTCGAGGGGATCACATATCAAAGGAGCACCTCTTTGTATATTGGCTTGCACCTATAGAGGCTACTCTTTTAGCAGTTGGGATGTTCAAATTGCTATTACGACATGTAAAAAATAATAAAATGGGCTCAAAAAATAAATCAGATTGA 621 0.3688 MSFNHSHVAEFVKIGFSIANMFFYAFIAKIFHGGTNNPLATLVDAISGDFRNFIFCIASRIPAQVIGYIVGVKLLMNTIPEVGHGPRLNVDIYRGALTEGILTFAIVVITLGIAATKIRGSFFLKTWISSIIKLTLHKLGSDLTGGCMNPASVMGWAFARGDHISKEHLFVYWLAPIEATLLAVGMFKLLLRHVKNNKMGSKNKSD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01483 206 Gene3D Glycerol uptake facilitator protein. 3 204 IPR023271 -
Trre11g01483 206 SUPERFAMILY Aquaporin-like 15 195 IPR023271 -
Trre11g01483 206 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01483 206 PRINTS Major intrinsic protein family signature 130 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01483 206 PRINTS Major intrinsic protein family signature 98 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01483 206 PRINTS Major intrinsic protein family signature 170 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g01483 206 PANTHER AQUAPORIN SIP2-1-RELATED 2 206 IPR044226 GO:0015267
Trre11g01483 206 Pfam Major intrinsic protein 12 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01483 Trre-Chr11 14395059 14396499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01483 10 206 Major Intrinsic Protein MIP AT3G56950 55.838 2.99e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01483 K09875 - gmx:100786138 287.73